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WormBase Tree Display for Gene: WBGene00028256

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Name Class

WBGene00028256SMapS_parentSequencecb25.fpc0143a
IdentityVersion2
NameCGC_nameCbr-vdac-1From_analysisInferred_from_orthology
Sequence_nameCBG05894
Molecular_nameCBG05894
CBG05894.1
CBP01603
Other_nameCBG_05894Accession_evidenceNDBHE600909
Public_nameCbr-vdac-1
DB_infoDatabaseNDBlocus_tagCBG_05894
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
226 Feb 2013 11:49:42WBPerson2970Name_changeCGC_nameCbr-vdac-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvdac
RNASeq_FPKMWBls:00000021121.95From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1152.6From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1252.5From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
960.745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1046.17From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1099.39From_analysisRNASeq.briggsae.WBls:0000002.control_median
1103From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000031063.55From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1201.35From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
925.743From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1101.56From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1177.6From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004568.065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
576.911From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
585.756From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
621.987From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
645.582From_analysisRNASeq.briggsae.WBls:0000004.control_mean
700.607From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
751.493From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:0000027403.798From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
625.05From_analysisRNASeq.briggsae.WBls:0000027.control_mean
715.853From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
755.498From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
705.232From_analysisRNASeq.briggsae.WBls:0000027.control_mean
735.675From_analysisRNASeq.briggsae.WBls:0000027.control_median
945.781From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351567.58From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381098.22From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1108.26From_analysisRNASeq.briggsae.WBls:0000038.control_median
1118.3From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1142.49From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1625.65From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
727.774From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000411064.55From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1084.15From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1121.45From_analysisRNASeq.briggsae.WBls:0000041.control_median
1123.05From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1158.76From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1184.75From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1019.37From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
1040.59From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1074.35From_analysisRNASeq.briggsae.WBls:0000041.control_median
731.973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631033.34From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1176.61From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1273.25From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1645.87From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
961.18From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
969.402From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1047.74From_analysisRNASeq.briggsae.WBls:0000063.control_median
1062.14From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
1157.53From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001011030.89From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1084.15From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1054.16From_analysisRNASeq.briggsae.total_over_all_stages.control_median
998.764From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00131698
00131699
00131700
00131701
Ortholog (32)
Structured_descriptionAutomated_descriptionPredicted to enable voltage-gated monoatomic anion channel activity. Predicted to be involved in monoatomic anion transmembrane transport. Predicted to be located in mitochondrial outer membrane. Is an ortholog of C. elegans vdac-1. In C. elegans, vdac-1 is involved in mitochondrion organization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05894
Corresponding_CDS_historyCBG05894:bp194
Corresponding_transcriptCBG05894.1
Other_sequence (112)
Experimental_infoExpr_patternExpr1066298
Microarray_resultsGPL8303_CB6_WBGene00028256_A
GPL8303_CB6_WBGene00028256_B
GPL8303_CB6_WBGene00028256_C
GPL14143_CBG05894_147-206_0.872_4_B
GPL14143_CBG05894_228-287_0.913_1_C
GPL14143_CBG05894_771-830_0.696_32_A
MethodGene