WormBase Tree Display for Gene: WBGene00027959

WBGene00027959 SMap: S_parent: Sequence: cb25.fpc0110
  Identity: Version: 2
    Name: CGC_name: Cbr-cpi-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG05524
      Molecular_name: CBG05524
        CBG05524.1
        CBP01363
      Other_name: CBG_05524 Accession_evidence: NDB HE601369
      Public_name: Cbr-cpi-1
    DB_info: Database: NDB locus_tag CBG_05524
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:57 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 15 Oct 2007 15:19:45 WBPerson2970 Name_change: CGC_name: Cbr-cpi-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cpi
    Allele: WBVar00056265
    RNASeq_FPKM: WBls:0000002 105.987 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        195.844 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        60.2987 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        61.8171 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        67.1099 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        72.4028 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        97.5907 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 1.57553 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        1.61783 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        1.66013 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        2.09102 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        3.03739 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 3.54079 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        3.5754 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        3.61 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        2.47122 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        2.47242 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        3.34055 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        4.60831 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 11.6729 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.46784 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        27.5266 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        6.02428 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        134.197 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        16.7754 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        42.3039 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 121.476 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 104.954 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        107.774 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        116.304 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        11.9435 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        209.243 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        93.6043 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 110.2 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        130.583 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        281.988 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        61.0647 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        69.0806 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        89.6403 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        158.591 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        163.27 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        206.982 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        250.304 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 159.16 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        36.9439 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        37.5391 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        37.7409 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        42.4676 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        62.7703 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        119.515 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        40.1043 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        72.2278 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 61.0647 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        80.2543 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        61.4409 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        82.1938 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00131379
    Ortholog (38)
    Paralog: WBGene00030877 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00087830 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00027960 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00035810 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable cysteine-type endopeptidase inhibitor activity. Is an ortholog of C. elegans cpi-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG05524
    Corresponding_CDS_history: CBG05524:bp194
      CBG05524:bp255
    Corresponding_transcript: CBG05524.1
    Other_sequence (11)
  Experimental_info: Expr_pattern: Expr1059392
    Microarray_results: GPL8303_CB6_WBGene00027959_A
      GPL8303_CB6_WBGene00027959_B
      GPL14143_CBG05524_306-365_0.975_1_A
    Expression_cluster: WBPaper00059178:Cbr-spr-4(gu163)_upregulated
  Method: Gene