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WormBase Tree Display for Gene: WBGene00027942

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Name Class

WBGene00027942SMapS_parentSequencecb25.fpc0110
IdentityVersion1
NameSequence_nameCBG05502
Molecular_nameCBG05502
CBG05502.1
CBP30721
Other_nameCBG_05502Accession_evidenceNDBHE601369
Public_nameCBG05502
DB_infoDatabaseNDBlocus_tagCBG_05502
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000210.9232From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
12.159From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
27.9451From_analysisRNASeq.briggsae.WBls:0000002.control_mean
60.753From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
11.5411From_analysisRNASeq.briggsae.WBls:0000002.control_median
22.5585From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.3988From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000031.9923From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
2.76821From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
3.54413From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.27079From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
2.26907From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000414.161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
16.1949From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
18.2288From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
13.95From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
14.1377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
15.497From_analysisRNASeq.briggsae.WBls:0000004.control_mean
17.0075From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.460633From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
12.0238From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.51532From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
33.0954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
17.8054From_analysisRNASeq.briggsae.WBls:0000027.control_median
18.0701From_analysisRNASeq.briggsae.WBls:0000027.control_mean
36.2089From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003517.1979From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003821.5859From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
23.0777From_analysisRNASeq.briggsae.WBls:0000038.control_median
24.5696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
25.3408From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.38678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
51.821From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000413.36443From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
6.91409From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.83187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
7.89854From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.96521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
8.49486From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
21.037From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
8.23003From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.65765From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
9.5585From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006310.7638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
11.8226From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
11.8606From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
13.3682From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
16.5677From_analysisRNASeq.briggsae.WBls:0000063.control_mean
35.0235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
11.0758From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
11.8416From_analysisRNASeq.briggsae.WBls:0000063.control_median
15.6524From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010112.0897From_analysisRNASeq.briggsae.total_over_all_stages.control_median
16.3215From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
12.1243From_analysisRNASeq.briggsae.total_over_all_stages.control_median
15.8702From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (19)
ParalogWBGene00027926Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00027935Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00042629Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00027936Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027937Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027939Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027941Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028546Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042938Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00303120Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Protein of unknown function (DUF272) and Protein of unknown function DUF272. Is an ortholog of C. elegans C49A9.6.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05502
Corresponding_CDS_historyCBG05502:bp194
Corresponding_transcriptCBG05502.1
Other_sequenceCR12637
CRC10126_1
Experimental_infoExpr_patternExpr1051948
Microarray_resultsGPL8303_CB6_WBGene00027942_A
GPL8303_CB6_WBGene00027942_B
GPL14143_CBG05502_957-1016_0.952_1_A
MethodGene