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WormBase Tree Display for Gene: WBGene00027939

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Name Class

WBGene00027939SMapS_parentSequencecb25.fpc0110
IdentityVersion1
NameSequence_nameCBG05499
Molecular_nameCBG05499
CBG05499.1
CBP07101
Other_nameCBG_05499Accession_evidenceNDBHE601369
Public_nameCBG05499
DB_infoDatabaseNDBlocus_tagCBG_05499
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
Allele (11)
RNASeq_FPKMWBls:00000020.206417From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.514609From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.700342From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.38From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.24306From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.378834From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.586021From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.354507From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.382003From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.409498From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.254668From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.511895From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
0.764217From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.01654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.085685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.195634From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.482377From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.602129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (11)
WBls:00000270.029072From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.069127From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.297541From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.794424From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.056243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
0.062685From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.237216From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000350.524598From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.313357From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0.70593From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.716026From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.726122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.7547From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.27339From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.144449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.194705From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.221501From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.248297From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.270006From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.492573From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.370435From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.401315From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.624853From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.703012From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.236191From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.377377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.753167From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.997665From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.75617From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.86542From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.809924From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.866681From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.975834From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001010.409498From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.567261From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.393438From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.521786From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (26)
ParalogWBGene00027926Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027935Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027936Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027937Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027941Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027942Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028546Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042938Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00303120Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Protein of unknown function (DUF272) and Protein of unknown function DUF272. Is an ortholog of C. elegans F58F9.3 and F58F9.4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05499
Corresponding_transcriptCBG05499.1
Other_sequenceCJC12751_1
Experimental_infoExpr_patternExpr1057422
Microarray_resultsGPL8303_CB6_WBGene00027939_A
GPL14143_CBG05499_277-336_0.765_48_A
MethodGene