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WormBase Tree Display for Gene: WBGene00027889

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Name Class

WBGene00027889SMapS_parentSequencecb25.fpc0110
IdentityVersion2
NameCGC_nameCbr-acr-25From_analysisInferred_from_orthology
Sequence_nameCBG05439
Molecular_nameCBG05439
CBG05439.1
CBP41942
Other_nameCBG_05439Accession_evidenceNDBHE601369
Public_nameCbr-acr-25
DB_infoDatabaseNDBlocus_tagCBG_05439
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-acr-25
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classacr
RNASeq_FPKMWBls:00000020.359694From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.857413From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.893394From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.31915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.275969From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.626544From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.712052From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.173086From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.593753From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.01442From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.616501From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.661998From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041.98467From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
2.23684From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
2.489From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
2.60865From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
2.66568From_analysisRNASeq.briggsae.WBls:0000004.control_mean
2.76328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
3.48281From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.071385From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.678549From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.884385From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.90322From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.29088From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.4862From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.29165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.37806From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.492492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.56868From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.04211From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.16383From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.75898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.34831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000410.125082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.226408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.254833From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.283257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.306485From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.591194From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.303383From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.32351From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.324291From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.396298From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.263233From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.363525From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.429625From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.463332From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.661437From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.436848From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.446478From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.803461From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.678549From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.34682From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.741005From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.41225From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00131305
00131306
00131307
00131308
00131309
00131310
00131311
00131312
Ortholog (28)
Paralog (104)
Structured_descriptionAutomated_descriptionPredicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans acr-25.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05439
Corresponding_CDS_historyCBG05439:bp194
CBG05439:bp255
Corresponding_transcriptCBG05439.1
Other_sequenceAcan_isotig16139
JI224664.1
JI252964.1
Experimental_infoExpr_patternExpr1055752
Microarray_resultsGPL8303_CB6_WBGene00027889_A
GPL8303_CB6_WBGene00027889_B
GPL14143_CBG05439_631-690_0.879_35_C
GPL14143_CBG05439_972-1031_0.914_17_A
GPL14143_CBG05439_1317-1376_0.937_3_B
MethodGene