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WormBase Tree Display for Gene: WBGene00027832

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Name Class

WBGene00027832SMapS_parentSequencecb25.fpc0110
IdentityVersion2
NameCGC_nameCbr-vha-8From_analysisInferred_from_orthology
Sequence_nameCBG05372
Molecular_nameCBG05372
CBG05372.1
CBP01369
Other_nameCBG_05372Accession_evidenceNDBHE601369
Public_nameCbr-vha-8
DB_infoDatabaseNDBlocus_tagCBG_05372
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-vha-8
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvha
RNASeq_FPKMWBls:0000002177.763From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
260.227From_analysisRNASeq.briggsae.WBls:0000002.control_mean
278.302From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
324.615From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
224.071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
251.186From_analysisRNASeq.briggsae.WBls:0000002.control_median
251.188From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003121.154From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
154.363From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
87.9453From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
124.614From_analysisRNASeq.briggsae.WBls:0000003.control_mean
131.535From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004376.116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
378.861From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
381.606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
353.058From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
373.416From_analysisRNASeq.briggsae.WBls:0000004.control_mean
373.597From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
382.701From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:0000027132.816From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
233.079From_analysisRNASeq.briggsae.WBls:0000027.control_mean
40.1092From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
526.313From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
251.949From_analysisRNASeq.briggsae.WBls:0000027.control_median
267.58From_analysisRNASeq.briggsae.WBls:0000027.control_mean
371.083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035374.126From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038267.02From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
270.135From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
292.132From_analysisRNASeq.briggsae.WBls:0000038.control_median
314.129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
382.47From_analysisRNASeq.briggsae.WBls:0000038.control_mean
678.596From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041179.891From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
191.295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
200.083From_analysisRNASeq.briggsae.WBls:0000041.control_mean
202.604From_analysisRNASeq.briggsae.WBls:0000041.control_median
213.912From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
215.236From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
136.746From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
177.663From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
185.593From_analysisRNASeq.briggsae.WBls:0000041.control_median
185.79From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:0000063398.098From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
398.425From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
402.274From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
431.141From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
485.324From_analysisRNASeq.briggsae.WBls:0000063.control_mean
796.681From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
275.792From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
400.349From_analysisRNASeq.briggsae.WBls:0000063.control_median
450.402From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101324.615From_analysisRNASeq.briggsae.total_over_all_stages.control_median
341.249From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
319.372From_analysisRNASeq.briggsae.total_over_all_stages.control_median
324.276From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00131267
00131268
00131269
Ortholog (35)
Structured_descriptionAutomated_descriptionPredicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in proton transmembrane transport. Predicted to be part of proton-transporting two-sector ATPase complex, catalytic domain. Is an ortholog of C. elegans vha-8.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05372
Corresponding_CDS_historyCBG05372:bp194
Corresponding_transcriptCBG05372.1
Other_sequence (145)
Experimental_infoExpr_patternExpr1057986
Microarray_resultsGPL8303_CB6_WBGene00027832_A
GPL8303_CB6_WBGene00027832_B
GPL14143_CBG05372_189-248_0.896_15_C
GPL14143_CBG05372_340-399_0.911_9_A
GPL14143_CBG05372_466-525_0.944_1_B
Expression_clusterWBPaper00051425:CB_L4_vs_embryo_upregulated
WBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene