WormBase Tree Display for Gene: WBGene00026879

WBGene00026879 SMap: S_parent: Sequence: cb25.fpc0071g
  Identity: Version: 2
    Name: CGC_name: Cbr-dhs-3 From_analysis: Inferred_from_orthology
      Sequence_name: CBG04146
      Molecular_name: CBG04146
        CBG04146.1
        CBP27280
      Other_name: CBG_04146 Accession_evidence: NDB HE600926
      Public_name: Cbr-dhs-3
    DB_info: Database: NDB locus_tag CBG_04146
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:56 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 11 Sep 2007 11:04:04 WBPerson2970 Name_change: CGC_name: Cbr-dhs-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dhs
    RNASeq_FPKM: WBls:0000002 108.147 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        121.966 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        170.519 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        87.2307 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        106.666 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        60.7675 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        97.6889 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 0.607253 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        4.85173 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        9.0962 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        6.5304 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        9.88774 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 50.3 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        51.8989 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        53.4978 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        51.5969 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        54.3139 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        57.4454 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        58.7294 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 0.898435 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        126.664 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        4.10703 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        43.8898 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        29.7081 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        46.7447 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        55.3092 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 120.094 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 134.984 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        26.3031 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        342.244 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        71.926 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        85.6936 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        99.4613 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 59.0822 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        59.8146 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        67.5359 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        67.7331 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        75.2572 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        76.7785 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        57.4977 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        60.3124 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        60.8102 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        64.8734 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
      WBls:0000063 100.695 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        160.491 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        70.5232 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        75.4884 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        82.4839 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        97.9363 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        105.693 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        144.478 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        91.5894 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 76.7785 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        86.2549 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        71.2246 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        80.4714 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (33)
    Paralog (46)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Short-chain dehydrogenase/reductase SDR; short chain dehydrogenase; and NAD(P)-binding domain superfamily. Is an ortholog of C. elegans dhs-3. In C. elegans, dhs-3 is involved in response to oxidative stress. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG04146
    Corresponding_CDS_history: CBG04146:bp194
    Corresponding_transcript: CBG04146.1
    Other_sequence (32)
  Experimental_info: Expr_pattern: Expr1070289
    Microarray_results: GPL8303_CB6_WBGene00026879_A
      GPL8303_CB6_WBGene00026879_B
      GPL14143_CBG04146_402-461_0.847_44_C
      GPL14143_CBG04146_508-567_0.834_52_B
      GPL14143_CBG04146_692-751_0.860_35_A
  Method: Gene