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WormBase Tree Display for Gene: WBGene00026713

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Name Class

WBGene00026713SMapS_parentSequencecb25.fpc0071c2
IdentityVersion2
NameCGC_nameCbr-rpa-2From_analysisInferred_from_orthology
Sequence_nameCBG03956
Molecular_nameCBG03956a
CBG03956a.1
CBP06610
CBG03956b
CBP41001
CBG03956b.1
Other_nameCBG_03956Accession_evidenceNDBHE600906
Public_nameCbr-rpa-2
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-rpa-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrpa
RNASeq_FPKMWBls:0000002101.133From_analysisRNASeq.briggsae.WBls:0000002.control_mean
102.287From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
136.743From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
64.3678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
119.515From_analysisRNASeq.briggsae.WBls:0000002.control_median
137.414From_analysisRNASeq.briggsae.WBls:0000002.control_mean
246.257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003459.411From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
498.972From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
538.533From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
536.364From_analysisRNASeq.briggsae.WBls:0000003.control_mean
611.149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004306.763From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
311.517From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
316.271From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
275.181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
312.626From_analysisRNASeq.briggsae.WBls:0000004.control_mean
313.085From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
351.831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002716.8746From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
21.1036From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.72427From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
42.712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
25.4635From_analysisRNASeq.briggsae.WBls:0000027.control_mean
27.709From_analysisRNASeq.briggsae.WBls:0000027.control_median
38.5433From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003531.3025From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003831.2578From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
32.756From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
33.4448From_analysisRNASeq.briggsae.WBls:0000038.control_median
34.1336From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
34.8369From_analysisRNASeq.briggsae.WBls:0000038.control_mean
41.2004From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:0000041158.776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
265.799From_analysisRNASeq.briggsae.WBls:0000041.control_mean
300.761From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
301.228From_analysisRNASeq.briggsae.WBls:0000041.control_median
301.695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
301.963From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
215.464From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
249.223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
254.647From_analysisRNASeq.briggsae.WBls:0000041.control_mean
274.992From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:0000063100.112From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
132.642From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
77.862From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
78.1015From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
80.4963From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
93.8428From_analysisRNASeq.briggsae.WBls:0000063.control_mean
101.022From_analysisRNASeq.briggsae.WBls:0000063.control_mean
136.919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
90.3042From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:0000101137.762From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
80.4963From_analysisRNASeq.briggsae.total_over_all_stages.control_median
101.2From_analysisRNASeq.briggsae.total_over_all_stages.control_median
169.283From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00130290
00130291
00130292
00130293
00130294
OrthologWBGene00019767Caenorhabditis elegansFrom_analysisHillier-set
OrthoMCL
OMA
WormBase-Compara
WBGene00071113Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
CSP26.g21301Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP40.g4924Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-rpa-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00303.g9037Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_002969Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_10292000Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g775Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00033429Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Predicted to be involved in DNA recombination; DNA repair; and DNA replication. Predicted to be located in nucleus. Is an ortholog of C. elegans rpa-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG03956a
CBG03956b
Corresponding_CDS_historyCBG03956:bp194
Corresponding_transcriptCBG03956a.1
CBG03956b.1
Other_sequenceCGC00518_1
CRC01239_1
CR09300
CR09179
CBC03124_1
CJC02916_1
CR02657
Experimental_infoExpr_patternExpr1059307
Microarray_resultsGPL8303_CB6_WBGene00026713_A
GPL14143_CBG03956_595-654_0.761_95_A
MethodGene