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WormBase Tree Display for Gene: WBGene00026551

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Name Class

WBGene00026551SMapS_parentSequencecb25.fpc0071c2
IdentityVersion2
NameCGC_nameCbr-skr-1From_analysisInferred_from_orthology
Sequence_nameCBG03758
Molecular_nameCBG03758
CBG03758.1
CBP06686
Other_nameCBG_03758Accession_evidenceNDBHE600906
Public_nameCbr-skr-1
DB_infoDatabaseNDBlocus_tagCBG_03758
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-skr-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classskr
RNASeq_FPKMWBls:0000002349.85From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
366.796From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
469.073From_analysisRNASeq.briggsae.WBls:0000002.control_mean
690.572From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
486.179From_analysisRNASeq.briggsae.WBls:0000002.control_median
503.195From_analysisRNASeq.briggsae.WBls:0000002.control_mean
605.562From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003765.444From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
873.555From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
981.667From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
855.515From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
867.542From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004805.227From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
805.235From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
805.243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
1204.66From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
784.466From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
907.646From_analysisRNASeq.briggsae.WBls:0000004.control_mean
938.632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:0000027185.415From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
259.806From_analysisRNASeq.briggsae.WBls:0000027.control_mean
519.261From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
74.7434From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
247.832From_analysisRNASeq.briggsae.WBls:0000027.control_median
272.417From_analysisRNASeq.briggsae.WBls:0000027.control_mean
310.249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035312.313From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038228.795From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
349.204From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
353.237From_analysisRNASeq.briggsae.WBls:0000038.control_mean
358.698From_analysisRNASeq.briggsae.WBls:0000038.control_median
368.191From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
466.759From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:0000041422.378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
423.351From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
426.518From_analysisRNASeq.briggsae.WBls:0000041.control_median
429.686From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
472.948From_analysisRNASeq.briggsae.WBls:0000041.control_mean
616.378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
483.554From_analysisRNASeq.briggsae.WBls:0000041.control_median
511.089From_analysisRNASeq.briggsae.WBls:0000041.control_mean
537.422From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
637.319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:0000063440.511From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
444.638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
447.577From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
522.857From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
566.669From_analysisRNASeq.briggsae.WBls:0000063.control_mean
977.761From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
348.265From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
446.108From_analysisRNASeq.briggsae.WBls:0000063.control_median
530.268From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101429.686From_analysisRNASeq.briggsae.total_over_all_stages.control_median
471.058From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
446.108From_analysisRNASeq.briggsae.total_over_all_stages.control_median
523.231From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00130062
Ortholog (32)
Paralog (18)
Structured_descriptionAutomated_descriptionPredicted to be involved in ubiquitin-dependent protein catabolic process. Is an ortholog of C. elegans skr-1. In C. elegans, skr-1 is involved in several processes, including negative regulation of intracellular signal transduction; regulation of cellular component organization; and regulation of protein stability.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG03758
Corresponding_CDS_historyCBG03758:bp194
Corresponding_transcriptCBG03758.1
Other_sequence (160)
Experimental_infoExpr_patternExpr1068007
Microarray_resultsGPL8303_CB6_WBGene00026550_A
GPL8303_CB6_WBGene00026550_B
GPL8303_CB6_WBGene00026551_A
GPL8303_CB6_WBGene00026551_B
GPL14143_CBG03758_309-368_0.783_48_B
GPL14143_CBG03758_368-427_0.933_3_C
GPL14143_CBG03758_437-496_0.949_1_A
MethodGene