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WormBase Tree Display for Gene: WBGene00026542

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Name Class

WBGene00026542SMapS_parentSequencecb25.fpc0071d
IdentityVersion2
NameCGC_nameCbr-nkb-1From_analysisInferred_from_orthology
Sequence_nameCBG03745
Molecular_nameCBG03745
CBG03745.1
CBP25943
Other_nameCBG_03745Accession_evidenceNDBHE600990
Public_nameCbr-nkb-1
DB_infoDatabaseNDBlocus_tagCBG_03745
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
221 Oct 2008 14:49:35WBPerson2970Name_changeCGC_nameCbr-nkb-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnkb
RNASeq_FPKMWBls:0000002170.694From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
174.622From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
187.137From_analysisRNASeq.briggsae.WBls:0000002.control_mean
216.095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
107.847From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
167.314From_analysisRNASeq.briggsae.WBls:0000002.control_mean
172.658From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:0000003109.743From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
127.022From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
92.4649From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
110.134From_analysisRNASeq.briggsae.WBls:0000003.control_mean
110.915From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004255.483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
265.614From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
275.745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
253.423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
270.763From_analysisRNASeq.briggsae.WBls:0000004.control_mean
281.462From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
287.701From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:0000027128.622From_analysisRNASeq.briggsae.WBls:0000027.control_mean
259.115From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
41.2355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
85.5159From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
153.515From_analysisRNASeq.briggsae.WBls:0000027.control_mean
156.855From_analysisRNASeq.briggsae.WBls:0000027.control_median
228.194From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035242.037From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038109.268From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
169.378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
172.995From_analysisRNASeq.briggsae.WBls:0000038.control_mean
178.37From_analysisRNASeq.briggsae.WBls:0000038.control_median
187.362From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
225.973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041106.859From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
107.491From_analysisRNASeq.briggsae.WBls:0000041.control_median
108.122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
110.193From_analysisRNASeq.briggsae.WBls:0000041.control_mean
132.159From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
93.6325From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
110.266From_analysisRNASeq.briggsae.WBls:0000041.control_mean
126.001From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
94.8212From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063153.225From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
161.446From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
167.703From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
174.374From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
188.895From_analysisRNASeq.briggsae.WBls:0000063.control_mean
287.729From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
138.201From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
164.574From_analysisRNASeq.briggsae.WBls:0000063.control_median
180.446From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101170.694From_analysisRNASeq.briggsae.total_over_all_stages.control_median
175.118From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
170.036From_analysisRNASeq.briggsae.total_over_all_stages.control_median
176.5From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00130052
00130053
00130054
Ortholog (32)
ParalogWBGene00029440Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00027108Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in potassium ion transport and sodium ion transport. Predicted to be part of sodium:potassium-exchanging ATPase complex. Is an ortholog of C. elegans nkb-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG03745
Corresponding_CDS_historyCBG03745:bp194
Corresponding_transcriptCBG03745.1
Other_sequence (36)
Experimental_infoExpr_patternExpr1053733
Microarray_resultsGPL8303_CB6_WBGene00026542_A
GPL8303_CB6_WBGene00026542_B
GPL14143_CBG03745_682-741_0.746_67_C
GPL14143_CBG03745_836-895_0.906_5_A
GPL14143_CBG03745_900-959_0.963_1_B
Expression_clusterWBPaper00051425:CB_L1_vs_embryo_upregulated
WBPaper00051425:CB_L4_vs_embryo_upregulated
MethodGene