WormBase Tree Display for Gene: WBGene00026492

WBGene00026492 SMap: S_parent: Sequence: cb25.fpc0071a
  Identity: Version: 2
    Name: CGC_name: Cbr-toe-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG03684
      Molecular_name: CBG03684
        CBG03684.1
        CBP21319
      Other_name: CBG_03684 Accession_evidence: NDB HE600948
      Public_name: Cbr-toe-1
    DB_info: Database: NDB locus_tag CBG_03684
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:56 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 02 Mar 2009 13:42:13 WBPerson2970 Name_change: CGC_name: Cbr-toe-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: toe
    RNASeq_FPKM: WBls:0000002 10.7505 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        11.8564 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        14.8485 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        5.5465 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        10.0601 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        10.5779 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        10.9583 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 13.9838 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        15.866 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        17.7483 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        13.1788 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        14.9703 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 24.1469 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        24.4919 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        24.837 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        21.4431 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        24.013 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        24.0925 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        25.5453 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 14.9423 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        3.60303 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        8.37054 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        8.97196 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        11.6564 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        11.9125 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        20.7342 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 14.696 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 12.1582 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        15.7638 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        16.1191 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        16.3806 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        16.9974 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        19.5569 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 14.1825 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        17.5339 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        18.4919 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        18.776 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        20.0181 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        22.2331 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        13.5439 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        15.8582 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        16.2455 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        9.96147 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 32.2401 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        32.4795 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        33.554 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        33.7118 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        34.1674 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        38.8514 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        20.7957 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        31.9387 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        33.0168 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 15.7638 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        18.0988 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        16.3806 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        18.0058 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (29)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: BP28CT (NUC211) domain; Armadillo-type fold; Armadillo-like helical; BP28, C-terminal domain; U3 small nucleolar RNA-associated protein 10; and U3 small nucleolar RNA-associated protein 10, N-terminal. Is an ortholog of C. elegans toe-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG03684
    Corresponding_CDS_history: CBG03684:bp194
      CBG03684:bp255
    Corresponding_transcript: CBG03684.1
    Other_sequence (20)
  Experimental_info: Expr_pattern: Expr1057263
    Microarray_results: GPL8303_CB6_WBGene00026492_A
      GPL8303_CB6_WBGene00026492_B
      GPL14143_CBG03684_1431-1490_0.809_2_B
      GPL14143_CBG03684_3902-3961_0.811_1_A
      GPL14143_CBG03684_5627-5686_0.693_340_C
  Reference: WBPaper00035666
  Method: Gene