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WormBase Tree Display for Gene: WBGene00026396

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Name Class

WBGene00026396SMapS_parentSequencecb25.fpc0066
IdentityVersion2
NameCGC_nameCbr-dpy-17From_analysisInferred_from_orthology
Sequence_nameCBG03553
Molecular_nameCBG03553
CBG03553.1
CBP00966
Other_nameCBG_03553Accession_evidenceNDBHE601339
Public_nameCbr-dpy-17
DB_infoDatabaseNDBlocus_tagCBG_03553
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-dpy-17
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdpy
RNASeq_FPKMWBls:0000002131.283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
6.58874From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
68.5769From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
68.8162From_analysisRNASeq.briggsae.WBls:0000002.control_mean
58.7596From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
63.6683From_analysisRNASeq.briggsae.WBls:0000002.control_median
66.3021From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003133.16From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
258.464From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
383.768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
235.461From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
250.796From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000041779.11From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1857.86From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1936.61From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1624.71From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1853.39From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1860.22From_analysisRNASeq.briggsae.WBls:0000004.control_mean
2107.27From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.075834From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.558354From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.984643From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.31974From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.463449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
0.510902From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.854344From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000350.064697From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.03183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.237272From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.529719From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.807337From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0.822167From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.13808From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004118.0697From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.51329From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
6.11526From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
6.72987From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.34448From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
8.76068From_analysisRNASeq.briggsae.WBls:0000041.control_mean
10.058From_analysisRNASeq.briggsae.WBls:0000041.control_median
11.3958From_analysisRNASeq.briggsae.WBls:0000041.control_mean
12.7715From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
20.5605From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.022741From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.113707From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.028043From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.054551From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:0000101157.116From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.40186From_analysisRNASeq.briggsae.total_over_all_stages.control_median
275.521From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.352From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00129909
Ortholog (29)
Paralog (155)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Is an ortholog of C. elegans dpy-17. In C. elegans, dpy-17 is involved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG03553
Corresponding_CDS_historyCBG03553:bp194
Corresponding_transcriptCBG03553.1
Other_sequence (51)
Experimental_infoExpr_patternExpr1062735
Microarray_resultsGPL8303_CB6_WBGene00026396_A
GPL8303_CB6_WBGene00026396_B
GPL14143_CBG03553_562-621_0.692_42_C
GPL14143_CBG03553_970-1029_0.942_2_B
GPL14143_CBG03553_973-1032_0.978_1_A
Expression_clusterWBPaper00059178:Cbr-htz-1(gu167)_upregulated
WBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene