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WormBase Tree Display for Gene: WBGene00025959

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Name Class

WBGene00025959SMapS_parentSequencecb25.fpc0058
IdentityVersion2
NameCGC_nameCbr-cdl-1From_analysisInferred_from_orthology
Sequence_nameCBG03013
Molecular_nameCBG03013
CBG03013.1
CBP14493
Other_nameCBG_03013Accession_evidenceNDBHE601438
Public_nameCbr-cdl-1
DB_infoDatabaseNDBlocus_tagCBG_03013
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-cdl-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcdl
RNASeq_FPKMWBls:000000284.6879From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
85.1786From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
88.7406From_analysisRNASeq.briggsae.WBls:0000002.control_mean
96.3552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
108.093From_analysisRNASeq.briggsae.WBls:0000002.control_mean
166.15From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
90.7669From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:0000003574.161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
601.364From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
628.566From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
615.129From_analysisRNASeq.briggsae.WBls:0000003.control_mean
642.661From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004403.911From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
405.353From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
406.796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
387.378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
404.694From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
409.207From_analysisRNASeq.briggsae.WBls:0000004.control_mean
443.255From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002711.0282From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
19.8449From_analysisRNASeq.briggsae.WBls:0000027.control_mean
43.7403From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.7663From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
20.5105From_analysisRNASeq.briggsae.WBls:0000027.control_median
22.3819From_analysisRNASeq.briggsae.WBls:0000027.control_mean
29.9928From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003522.7212From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003818.8896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
22.4372From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
28.3655From_analysisRNASeq.briggsae.WBls:0000038.control_mean
28.7946From_analysisRNASeq.briggsae.WBls:0000038.control_median
35.1521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
36.983From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041166.081From_analysisRNASeq.briggsae.WBls:0000041.control_mean
190.026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
195.329From_analysisRNASeq.briggsae.WBls:0000041.control_median
200.633From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
209.601From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
64.0658From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
107.392From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
144.83From_analysisRNASeq.briggsae.WBls:0000041.control_mean
148.709From_analysisRNASeq.briggsae.WBls:0000041.control_median
97.2595From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:0000063115.105From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
69.9568From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
71.1288From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
73.6199From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
74.9423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
80.9506From_analysisRNASeq.briggsae.WBls:0000063.control_mean
74.2811From_analysisRNASeq.briggsae.WBls:0000063.control_median
81.1634From_analysisRNASeq.briggsae.WBls:0000063.control_mean
82.2275From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:0000101127.929From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
69.9568From_analysisRNASeq.briggsae.total_over_all_stages.control_median
159.762From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
78.5849From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00129399
00129400
Ortholog (28)
Structured_descriptionAutomated_descriptionPredicted to enable mRNA binding activity. Is an ortholog of C. elegans cdl-1. In C. elegans, cdl-1 is involved in apoptotic process; embryo development; and mitotic chromosome condensation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG03013
Corresponding_CDS_historyCBG03013:bp194
Corresponding_transcriptCBG03013.1
Other_sequence (16)
Experimental_infoExpr_patternExpr1051538
Microarray_resultsGPL8303_CB6_WBGene00025959_A
GPL8303_CB6_WBGene00025959_B
GPL14143_CBG03013_769-828_0.826_6_B
GPL14143_CBG03013_838-897_0.847_1_C
GPL14143_CBG03013_1045-1104_0.837_2_A
MethodGene