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WormBase Tree Display for Gene: WBGene00025682

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Name Class

WBGene00025682SMapS_parentSequencecb25.fpc0058
IdentityVersion3
NameCGC_nameCbr-plpp-1.2From_analysisInferred_from_orthology
Sequence_nameCBG02670
Molecular_nameCBG02670a
CBG02670a.1
CBP49311
CBG02670b
CBP49456
CBG02670c
CBP49555
CBG02670b.1
CBG02670c.1
Other_nameCBG_02670Accession_evidenceNDBHE601438
Public_nameCbr-plpp-1.2
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
224 Jul 2008 11:56:32WBPerson1847EventAcquires_mergeWBGene00025681
331 May 2017 14:28:06WBPerson2970Name_changeCGC_nameCbr-plpp-1.2
Acquires_mergeWBGene00025681
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classplpp
RNASeq_FPKMWBls:000000210.8362From_analysisRNASeq.briggsae.WBls:0000002.control_mean
16.9148From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
7.67957From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
7.91419From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
12.278From_analysisRNASeq.briggsae.WBls:0000002.control_median
12.2876From_analysisRNASeq.briggsae.WBls:0000002.control_mean
16.6418From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000035.12726From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
7.474From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
9.82074From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
7.9084From_analysisRNASeq.briggsae.WBls:0000003.control_mean
8.7772From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000044.10041From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
5.52662From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
6.95283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
10.6784From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
7.36966From_analysisRNASeq.briggsae.WBls:0000004.control_mean
7.4425From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
7.67415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000271.30685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
16.0933From_analysisRNASeq.briggsae.WBls:0000027.control_mean
42.2662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.70671From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
12.9798From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.63951From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
4.17311From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:00000355.8391From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.4451From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
14.9252From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.62185From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
6.39106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
9.0958From_analysisRNASeq.briggsae.WBls:0000038.control_mean
9.41808From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:000004113.1796From_analysisRNASeq.briggsae.WBls:0000041.control_mean
27.3563From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
7.61611From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
8.81202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
8.87307From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.93413From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
18.1452From_analysisRNASeq.briggsae.WBls:0000041.control_median
21.8152From_analysisRNASeq.briggsae.WBls:0000041.control_mean
35.2066From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
42.9659From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006316.3001From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.1195From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
6.79413From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
7.22021From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
7.97454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
8.6817From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.15348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
7.00717From_analysisRNASeq.briggsae.WBls:0000063.control_median
8.26033From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001017.61611From_analysisRNASeq.briggsae.total_over_all_stages.control_median
9.37184From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
10.8148From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.67686From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00129103
Ortholog (26)
ParalogWBGene00025905Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027170Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027174Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037857Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in phospholipid metabolic process. Is an ortholog of C. elegans plpp-1.2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG02670a
CBG02670b
CBG02670c
Corresponding_CDS_historyCBG02670:bp194
CBG02670a:bp266
Corresponding_transcriptCBG02670a.1
CBG02670b.1
CBG02670c.1
Other_sequenceCRC12305_1
Tcol_isotig14688
JI167794.1
CR04593
Tcir_isotig11281
Acan_isotig07031
EX552926.1
Oden_isotig20541
Dviv_isotig23813
ACC22133_1
Experimental_infoExpr_patternExpr1063312
Microarray_resultsGPL8303_CB6_WBGene00025681_A
GPL8303_CB6_WBGene00025681_B
GPL14143_CBG02670_304-363_0.808_11_B
GPL14143_CBG02670_396-455_0.758_36_A
GPL14143_CBG02670_433-492_0.475_163_C
MethodGene