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WormBase Tree Display for Gene: WBGene00025659

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Name Class

WBGene00025659SMapS_parentSequencecb25.fpc0058
IdentityVersion2
NameCGC_nameCbr-lin-23From_analysisInferred_from_orthology
Sequence_nameCBG02640
Molecular_nameCBG02640a
CBG02640a.1
CBP40016
CBG02640b
CBP41819
CBG02640b.1
Other_nameCBG_02640Accession_evidenceNDBHE601438
Public_nameCbr-lin-23
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-lin-23
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlin
AlleleWBVar00135982
WBVar00107560
WBVar00107561
RNASeq_FPKMWBls:000000232.7108From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
53.1653From_analysisRNASeq.briggsae.WBls:0000002.control_mean
53.2372From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
73.5478From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
53.3439From_analysisRNASeq.briggsae.WBls:0000002.control_mean
53.5586From_analysisRNASeq.briggsae.WBls:0000002.control_median
53.88From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003122.596From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
147.927From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
97.2657From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
112.704From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
119.299From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000471.5495From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
72.8047From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
74.0599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
66.6101From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
69.5075From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
73.6438From_analysisRNASeq.briggsae.WBls:0000004.control_mean
86.492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002712.9343From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
22.6937From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.04808From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
51.0987From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
27.8107From_analysisRNASeq.briggsae.WBls:0000027.control_mean
28.048From_analysisRNASeq.briggsae.WBls:0000027.control_median
43.1616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003536.602From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003827.583From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
38.4561From_analysisRNASeq.briggsae.WBls:0000038.control_median
38.9383From_analysisRNASeq.briggsae.WBls:0000038.control_mean
49.3291From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
69.0816From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.7594From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004160.304From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
76.076From_analysisRNASeq.briggsae.WBls:0000041.control_mean
77.0207From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
79.3184From_analysisRNASeq.briggsae.WBls:0000041.control_median
81.6161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
85.3632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
52.7421From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
61.6566From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
69.3387From_analysisRNASeq.briggsae.WBls:0000041.control_median
69.7838From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006336.3111From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
36.8745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
38.0023From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
40.4792From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
44.3994From_analysisRNASeq.briggsae.WBls:0000063.control_mean
70.33From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
39.2407From_analysisRNASeq.briggsae.WBls:0000063.control_median
44.4906From_analysisRNASeq.briggsae.WBls:0000063.control_mean
44.9462From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010149.3291From_analysisRNASeq.briggsae.total_over_all_stages.control_median
52.532From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
52.9897From_analysisRNASeq.briggsae.total_over_all_stages.control_median
55.6613From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00129081
00129082
Ortholog (29)
ParalogWBGene00032586Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039261Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00086648Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable protein dimerization activity. Is an ortholog of C. elegans lin-23. In C. elegans, lin-23 is involved in several processes, including negative regulation of centrosome duplication; regulation of protein stability; and ubiquitin-dependent protein catabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG02640a
CBG02640b
Corresponding_CDS_historyCBG02640:bp194
CBG02640:bp255
Corresponding_transcriptCBG02640a.1
CBG02640b.1
Other_sequence (55)
Experimental_infoExpr_patternExpr1064742
Microarray_resultsGPL8303_CB6_WBGene00025659_A
GPL8303_CB6_WBGene00025659_B
GPL14143_CBG02640_985-1044_0.761_36_C
GPL14143_CBG02640_1015-1074_0.815_1_B
GPL14143_CBG02640_1040-1099_0.809_4_A
MethodGene