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WormBase Tree Display for Gene: WBGene00025548

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Name Class

WBGene00025548SMapS_parentSequencecb25.fpc0058
IdentityVersion2
NameCGC_nameCbr-ehs-1From_analysisInferred_from_orthology
Sequence_nameCBG02505
Molecular_nameCBG02505
CBG02505.1
CBP00667
Other_nameCBG_02505Accession_evidenceNDBHE601438
Public_nameCbr-ehs-1
DB_infoDatabaseNDBlocus_tagCBG_02505
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ehs-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classehs
RNASeq_FPKMWBls:000000216.5586From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
28.8971From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
29.487From_analysisRNASeq.briggsae.WBls:0000002.control_mean
43.0054From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
24.9613From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
26.9292From_analysisRNASeq.briggsae.WBls:0000002.control_median
28.3556From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000321.0385From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
28.64From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
36.2415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
23.7829From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
27.021From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000423.8874From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
26.0606From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
28.2337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
26.8371From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
27.2969From_analysisRNASeq.briggsae.WBls:0000004.control_mean
27.7405From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
29.7859From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002710.6389From_analysisRNASeq.briggsae.WBls:0000027.control_mean
20.5601From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.73499From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
7.62163From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
14.0909From_analysisRNASeq.briggsae.WBls:0000027.control_median
19.4151From_analysisRNASeq.briggsae.WBls:0000027.control_mean
45.7437From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003540.1342From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.6009From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
21.1357From_analysisRNASeq.briggsae.WBls:0000038.control_median
21.9133From_analysisRNASeq.briggsae.WBls:0000038.control_mean
31.6705From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.65758From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
41.7241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004111.3974From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
37.6417From_analysisRNASeq.briggsae.WBls:0000041.control_mean
44.7428From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
45.8951From_analysisRNASeq.briggsae.WBls:0000041.control_median
47.0473From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
47.3794From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
15.0214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
29.0537From_analysisRNASeq.briggsae.WBls:0000041.control_mean
29.8821From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.73389From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006316.4076From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
18.0997From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
18.7989From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
19.2361From_analysisRNASeq.briggsae.WBls:0000063.control_mean
20.2089From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
22.6652From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
19.5039From_analysisRNASeq.briggsae.WBls:0000063.control_median
19.9953From_analysisRNASeq.briggsae.WBls:0000063.control_mean
23.7917From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010122.6652From_analysisRNASeq.briggsae.total_over_all_stages.control_median
24.8078From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
23.8396From_analysisRNASeq.briggsae.total_over_all_stages.control_median
24.8901From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (30)
ParalogWBGene00023808Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038199Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041985Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: EH domain; EF-hand domain pair; and Cytoskeletal-regulatory complex EF hand. Is an ortholog of C. elegans ehs-1. In C. elegans, ehs-1 is involved in chemical synaptic transmission and synaptic vesicle endocytosis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG02505
Corresponding_CDS_historyCBG02505:bp194
Corresponding_transcriptCBG02505.1
Other_sequence (20)
Experimental_infoExpr_patternExpr1050299
Microarray_resultsGPL8303_CB6_WBGene00025548_A
GPL14143_CBG02505_1059-1118_0.798_9_C
GPL14143_CBG02505_1538-1597_0.477_342_B
GPL14143_CBG02505_2063-2122_0.804_5_A
MethodGene