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WormBase Tree Display for Gene: WBGene00025495

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Name Class

WBGene00025495SMapS_parentSequencecb25.fpc0058
IdentityVersion1
NameSequence_nameCBG02445
Molecular_nameCBG02445
CBG02445.1
CBP00577
Other_nameCBG_02445Accession_evidenceNDBHE601438
Public_nameCBG02445
DB_infoDatabaseNDBlocus_tagCBG_02445
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00141755
RNASeq_FPKMWBls:00000021.59249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
26.1626From_analysisRNASeq.briggsae.WBls:0000002.control_mean
27.3254From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
49.57From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
15.966From_analysisRNASeq.briggsae.WBls:0000002.control_median
20.7736From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.60656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.147752From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
10.5517From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
5.34973From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
5.83053From_analysisRNASeq.briggsae.WBls:0000003.control_mean
6.79215From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000412.8154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
12.8572From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
12.899From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
11.332From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
11.7519From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
11.956From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
12.1509From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:000002730.6814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
59.5472From_analysisRNASeq.briggsae.WBls:0000027.control_mean
60.4656From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
87.4946From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
117.921From_analysisRNASeq.briggsae.WBls:0000027.control_mean
293.042From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
73.9801From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:00000353.03054From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038161.79From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
33.4889From_analysisRNASeq.briggsae.WBls:0000038.control_median
5.55726From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
58.4883From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
58.5813From_analysisRNASeq.briggsae.WBls:0000038.control_mean
8.48947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000410.424273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.516924From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.925312From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.3337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.4781From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.63751From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.33776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
2.2569From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.29123From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006310.1696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
10.4412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
12.9539From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
13.7487From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
13.8127From_analysisRNASeq.briggsae.WBls:0000063.control_mean
21.7499From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.864132From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
11.6546From_analysisRNASeq.briggsae.WBls:0000063.control_mean
11.6975From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010110.5517From_analysisRNASeq.briggsae.total_over_all_stages.control_median
22.7722From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
10.4965From_analysisRNASeq.briggsae.total_over_all_stages.control_median
26.4307From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (28)
ParalogWBGene00040100Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Protein of unknown function DUF5346 and Family of unknown function (DUF5346). Is an ortholog of C. elegans T25E4.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG02445
Corresponding_CDS_historyCBG02445:bp194
CBG02445:bp255
Corresponding_transcriptCBG02445.1
Other_sequence (13)
Experimental_infoExpr_patternExpr1054953
Microarray_resultsGPL8303_CB6_WBGene00025495_A
GPL8303_CB6_WBGene00025495_B
GPL14143_CBG02445_75-134_0.837_5_C
GPL14143_CBG02445_369-428_0.816_8_B
GPL14143_CBG02445_625-684_0.899_1_A
MethodGene