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WormBase Tree Display for Gene: WBGene00025366

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Name Class

WBGene00025366SMapS_parentSequencecb25.fpc0058
IdentityVersion2
NameCGC_nameCbr-ndx-3From_analysisInferred_from_orthology
Sequence_nameCBG02288
Molecular_nameCBG02288
CBG02288.1
CBP33434
Other_nameCBG_02288Accession_evidenceNDBHE601438
Public_nameCbr-ndx-3
DB_infoDatabaseNDBlocus_tagCBG_02288
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ndx-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classndx
RNASeq_FPKMWBls:00000021.21198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.41931From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.30128From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.27254From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.53111From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.6429From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.13668From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000031.94526From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
2.24054From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.53581From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.92712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
2.13606From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.770055From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.66686From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
2.56366From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
1.92333From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
2.35229From_analysisRNASeq.briggsae.WBls:0000004.control_mean
2.62752From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
3.87691From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (11)
WBls:00000270.296641From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.03452From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.80692From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.723256From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.14987From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
1.81336From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000351.73062From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.183122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.49502From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.64102From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.78702From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.73402From_analysisRNASeq.briggsae.WBls:0000038.control_mean
7.47093From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000412.08017From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.13011From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.20452From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.27894From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.30152From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.71687From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.22311From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
2.25102From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.46544From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.36345From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000632.26976From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.3875From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.66204From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
4.27745From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.98222From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
9.08571From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
3.23383From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.80563From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
4.19881From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001012.13011From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.70053From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.17661From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.65408From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (24)
ParalogWBGene00029895Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00270389Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: NUDIX hydrolase domain; NUDIX domain; and NUDIX hydrolase-like domain superfamily. Is an ortholog of C. elegans ndx-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG02288
Corresponding_CDS_historyCBG02288:bp194
Corresponding_transcriptCBG02288.1
Other_sequenceTcir_isotig07818
FD517727.1
Oden_isotig08705
BUC01764_1
Dviv_isotig23936
CSC01885_1
Oden_isotig08703
Oden_isotig08706
Oden_isotig08704
Experimental_infoExpr_patternExpr1053998
Microarray_resultsGPL8303_CB6_WBGene00025366_A
GPL8303_CB6_WBGene00025366_B
GPL14143_CBG02288_313-372_0.683_71_C
GPL14143_CBG02288_465-524_0.878_7_B
GPL14143_CBG02288_648-707_0.865_11_A
MethodGene