Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00025282

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00025282SMapS_parentSequencecb25.fpc0053
IdentityVersion1
NameSequence_nameCBG02193
Molecular_nameCBG02193
CBG02193.1
CBP06240
Other_nameCBG_02193Accession_evidenceNDBHE601486
Public_nameCBG02193
DB_infoDatabaseNDBlocus_tagCBG_02193
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000243.1199From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
49.5344From_analysisRNASeq.briggsae.WBls:0000002.control_mean
51.5009From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
53.9823From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
52.7416From_analysisRNASeq.briggsae.WBls:0000002.control_median
55.7175From_analysisRNASeq.briggsae.WBls:0000002.control_mean
74.2669From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000360.9355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
64.0425From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
67.1496From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
60.0918From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
62.7256From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000414.759From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
15.6482From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
16.5375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
13.0949From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
16.1282From_analysisRNASeq.briggsae.WBls:0000004.control_mean
17.4133From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
18.8361From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.133407From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.401952From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.07245From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.424295From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.48026From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.715182From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.97669From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.860636From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.44649From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.71576From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.98988From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.98504From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
5.66736From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041120.73From_analysisRNASeq.briggsae.WBls:0000041.control_mean
131.298From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
141.773From_analysisRNASeq.briggsae.WBls:0000041.control_median
152.247From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
162.567From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
36.8064From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
101.562From_analysisRNASeq.briggsae.WBls:0000041.control_mean
62.928From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
63.5251From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
97.4116From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006333.4912From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
33.8015From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
34.5601From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
37.5652From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
41.853From_analysisRNASeq.briggsae.WBls:0000063.control_mean
69.847From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
36.0626From_analysisRNASeq.briggsae.WBls:0000063.control_median
43.285From_analysisRNASeq.briggsae.WBls:0000063.control_mean
50.4448From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010116.5375From_analysisRNASeq.briggsae.total_over_all_stages.control_median
35.0576From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
26.1637From_analysisRNASeq.briggsae.total_over_all_stages.control_median
36.2628From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (16)
ParalogWBGene00026940Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs affected by Cbr-htz-1 and Cbr-spr-4 based on RNA-seq studies. Is an ortholog of C. elegans Y18D10A.11.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG02193
Corresponding_CDS_historyCBG02193:bp194
Corresponding_transcriptCBG02193.1
Other_sequenceCR07791
CRC04302_1
CR09437
CGC00593_1
CBC16108_1
CRC08266_1
CRC08842_1
Experimental_infoExpr_patternExpr1056974
Microarray_resultsGPL8303_CB6_WBGene00025282_A
GPL8303_CB6_WBGene00025282_B
GPL8303_CB6_WBGene00025282_C
GPL14143_CBG02193_2316-2375_0.907_13_A
GPL14143_CBG02193_2611-2670_0.876_34_C
GPL14143_CBG02193_2818-2877_0.923_9_B
Expression_clusterWBPaper00059178:Cbr-htz-1(gu167)_upregulated
WBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene