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WormBase Tree Display for Gene: WBGene00025131

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Name Class

WBGene00025131SMapS_parentSequencecb25.fpc0045
IdentityVersion2
NameCGC_nameCbr-col-176From_analysisInferred_from_orthology
Sequence_nameCBG01972
Molecular_nameCBG01972
CBG01972.1
CBP06235
Other_nameCBG_01972Accession_evidenceNDBHE601451
Public_nameCbr-col-176
DB_infoDatabaseNDBlocus_tagCBG_01972
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-col-176
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcol
RNASeq_FPKMWBls:0000002208.55From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
380.305From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
425.535From_analysisRNASeq.briggsae.WBls:0000002.control_mean
687.749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
115.197From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
294.427From_analysisRNASeq.briggsae.WBls:0000002.control_median
347.95From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.188751From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.31607From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.443388From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.210713From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.051164From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.126225From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.129596From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002722.9844From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
23.2446From_analysisRNASeq.briggsae.WBls:0000027.control_mean
38.8834From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
7.86609From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
15.4253From_analysisRNASeq.briggsae.WBls:0000027.control_median
19.0407From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.42895From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035227.54From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381074.9From_analysisRNASeq.briggsae.WBls:0000038.control_median
1193.75From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1666.3From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2224.34From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
400.841From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
483.502From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.764776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.774601From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
10.4554From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.19402From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.61344From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
38.6687From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.43946From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.26548From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
7.91654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
8.83392From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.61291From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.77341From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.10594From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.67784From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.47038From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.642846From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
2.41832From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.85943From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010122.9844From_analysisRNASeq.briggsae.total_over_all_stages.control_median
270.135From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
209.674From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.44967From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00128526
Contained_in_operonCBOPA0502
Ortholog (30)
Paralog (14)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-176.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01972
Corresponding_CDS_historyCBG01972:bp194
Corresponding_transcriptCBG01972.1
Other_sequence (38)
Experimental_infoExpr_patternExpr1061044
Microarray_resultsGPL8303_CB6_WBGene00025131_A
GPL8303_CB6_WBGene00025131_B
GPL14143_CBG01972_106-165_0.345_154_C
GPL14143_CBG01972_203-262_0.805_3_A
GPL14143_CBG01972_378-437_0.613_13_B
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene