WormBase Tree Display for Gene: WBGene00025016

WBGene00025016 SMap: S_parent: Sequence: cb25.fpc0039
  Identity: Version: 2
    Name: CGC_name: Cbr-spin-2 From_analysis: Inferred_from_orthology
      Sequence_name: CBG01831
      Molecular_name: CBG01831
        CBG01831.1
        CBP00412
      Other_name: CBG_01831 Accession_evidence: NDB HE601298
      Public_name: Cbr-spin-2
    DB_info: Database: NDB locus_tag CBG_01831
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:54 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 04 Jun 2013 14:55:26 WBPerson2970 Name_change: CGC_name: Cbr-spin-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: spin
    Allele: WBVar00069671
      WBVar00069676
      WBVar00044189
      WBVar00069681
      WBVar00069686
      WBVar00069691
      WBVar00069696
      WBVar00015174
      WBVar00069666
    RNASeq_FPKM: WBls:0000002 10.9762 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        4.4053 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        6.08482 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        7.15544 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        1.92824 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        5.24506 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        5.84864 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.095722 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        0.193082 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.290443 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0.128722 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 6.48161 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        7.10176 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        7.7219 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        5.96961 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        6.26479 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        6.71173 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        7.12072 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 0.396137 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        1.78797 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        3.27496 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        7.64078 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        4.71438 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        4.84153 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        9.54123 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 12.4836 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 1.09282 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        12.6072 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        7.40257 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        7.52338 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        8.19675 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        8.99093 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 1.44157 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        1.48747 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        1.66289 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1.83831 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        2.62257 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        5.72291 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        2.67744 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        2.97639 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        3.51658 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        3.85151 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 1.28561 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        1.42735 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        1.74914 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        1.7935 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.91948 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        2.58594 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        1.83431 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        2.0946 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        3.60009 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 4.4053 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        5.63161 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        4.12841 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        5.39761 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00128442
      00128443
    Ortholog (50)
    Paralog: WBGene00026406 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027743 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041750 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Is an ortholog of C. elegans spin-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG01831
    Corresponding_CDS_history: CBG01831:bp194
    Corresponding_transcript: CBG01831.1
    Other_sequence (13)
  Experimental_info: Expr_pattern: Expr1050653
    Microarray_results: GPL8303_CB6_WBGene00025016_A
      GPL8303_CB6_WBGene00025016_B
      GPL14143_CBG01831_582-641_0.888_11_C
      GPL14143_CBG01831_816-875_0.925_4_B
      GPL14143_CBG01831_1000-1059_0.779_90_A
  Method: Gene