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WormBase Tree Display for Gene: WBGene00024931

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Name Class

WBGene00024931SMapS_parentSequencecb25.fpc0039
IdentityVersion2
NameCGC_nameCbr-tctn-1From_analysisInferred_from_orthology
Sequence_nameCBG01743
Molecular_nameCBG01743
CBG01743.1
CBP41465
Other_nameCBG_01743Accession_evidenceNDBHE601298
Public_nameCbr-tctn-1
DB_infoDatabaseNDBlocus_tagCBG_01743
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
208 Dec 2011 14:46:22WBPerson2970Name_changeCGC_nameCbr-tctn-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtctn
AlleleWBVar00069491
WBVar00069496
WBVar00069501
WBVar00069506
RNASeq_FPKMWBls:00000020.700915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.958041From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.20866From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.96704From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.14442From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.33079From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.9892From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.405367From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.626289From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.847211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.805276From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.16325From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000046.62438From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
7.25808From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
7.89178From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
5.09106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
6.82272From_analysisRNASeq.briggsae.WBls:0000004.control_mean
6.85993From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
7.64647From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.084056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.299451From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.537349From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.22854From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.763996From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.786894From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.53553From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.730771From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.128798From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.13924From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.29324From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.39443From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.49562From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.6393From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.532675From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.744828From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.960979From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.07203From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.17713From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.83348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.50531From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.648From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.47928From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
3.12063From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.10296From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.126025From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.366873From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.786995From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.818385From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.098976From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.114492From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.322223From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001010.847211From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.57759From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.20283From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.97569From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (15)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Tectonic domain; Tectonic; and Tectonic domain DUF1619. Is an ortholog of C. elegans tctn-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01743
Corresponding_CDS_historyCBG01743:bp194
CBG01743:bp255
Corresponding_transcriptCBG01743.1
Other_sequenceCBC00348_1
FD515247.1
FD514129.1
CR00743
CJC01862_1
CRC04745_1
ACC09020_1
CSC00336_1
EY461619.1
Experimental_infoExpr_patternExpr1051053
Microarray_resultsGPL8303_CB6_WBGene00024931_A
GPL8303_CB6_WBGene00024931_B
GPL14143_CBG01743_257-316_0.867_32_C
GPL14143_CBG01743_653-712_0.901_13_B
GPL14143_CBG01743_954-1013_0.950_3_A
MethodGene