Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00024565

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00024565SMapS_parentSequencecb25.fpc0023
IdentityVersion2
NameCGC_nameCbr-clec-218From_analysisInferred_from_orthology
Sequence_nameCBG01306
Molecular_nameCBG01306
CBG01306.1
CBP05968
Other_nameCBG_01306Accession_evidenceNDBHE601256
Public_nameCbr-clec-218
DB_infoDatabaseNDBlocus_tagCBG_01306
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
221 Apr 2008 17:10:48WBPerson2970Name_changeCGC_nameCbr-clec-218
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
AlleleWBVar00006374
WBVar00006389
WBVar00067456
WBVar00006379
WBVar00006394
WBVar00006399
WBVar00006384
RNASeq_FPKMWBls:000000216.613From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
18.5211From_analysisRNASeq.briggsae.WBls:0000002.control_mean
19.2083From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
19.742From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
11.0266From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
16.6475From_analysisRNASeq.briggsae.WBls:0000002.control_mean
17.9107From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.133573From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.267146From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.089049From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000041.34877From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.52357From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.69837From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.45996From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.47742From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1.58956From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.9633From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.194483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.96192From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
19.9231From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
7.35983From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.9425From_analysisRNASeq.briggsae.WBls:0000027.control_median
11.4613From_analysisRNASeq.briggsae.WBls:0000027.control_mean
23.7656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003524.7727From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.7966From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
113.388From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
34.6632From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.55354From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
7.9145From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
9.35555From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:00000410.633257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.90033From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.06095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.37733From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.69371From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
4.21342From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.821003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
1.42042From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
2.24068From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.30713From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
34.0183From_analysisRNASeq.briggsae.WBls:0000063.control_mean
38.503From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
43.675From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
43.7538From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
44.1596From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
29.7139From_analysisRNASeq.briggsae.WBls:0000063.control_mean
41.089From_analysisRNASeq.briggsae.WBls:0000063.control_median
8.19182From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010110.7966From_analysisRNASeq.briggsae.total_over_all_stages.control_median
20.4945From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
16.9597From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.23402From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (37)
Paralog (18)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: von Willebrand factor, type A; C-type lectin fold; von Willebrand factor type A domain; von Willebrand factor A-like domain superfamily; Lectin C-type domain; C-type lectin-like/link domain superfamily; and C-type lectin-like. Is an ortholog of C. elegans clec-218. In C. elegans, clec-218 is involved in defense response to Gram-positive bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01306
Corresponding_CDS_historyCBG01306:bp194
Corresponding_transcriptCBG01306.1
Experimental_infoExpr_patternExpr1067420
Microarray_resultsGPL8303_CB6_WBGene00024565_A
GPL8303_CB6_WBGene00024565_B
GPL14143_CBG01306_141-200_0.792_103_B
GPL14143_CBG01306_235-294_0.680_168_A
GPL14143_CBG01306_583-642_0.927_14_C
MethodGene