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WormBase Tree Display for Gene: WBGene00024362

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Name Class

WBGene00024362SMapS_parentSequencecb25.fpc0023
IdentityVersion2
NameCGC_nameCbr-rab-1From_analysisInferred_from_orthology
Sequence_nameCBG01077
Molecular_nameCBG01077
CBG01077.1
CBP44873
Other_nameCBG_01077Accession_evidenceNDBHE601256
Public_nameCbr-rab-1
DB_infoDatabaseNDBlocus_tagCBG_01077
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-rab-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrab
RNASeq_FPKMWBls:0000002249.619From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
311.624From_analysisRNASeq.briggsae.WBls:0000002.control_mean
324.216From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
361.038From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
327.244From_analysisRNASeq.briggsae.WBls:0000002.control_mean
342.627From_analysisRNASeq.briggsae.WBls:0000002.control_median
374.103From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003204.388From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
216.147From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
227.906From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
190.33From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
207.541From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004228.671From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
236.934From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
245.196From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
156.871From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
208.517From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
235.645From_analysisRNASeq.briggsae.WBls:0000004.control_mean
338.971From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:0000027177.195From_analysisRNASeq.briggsae.WBls:0000027.control_mean
217.759From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
227.599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
86.2274From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
203.907From_analysisRNASeq.briggsae.WBls:0000027.control_mean
222.679From_analysisRNASeq.briggsae.WBls:0000027.control_median
284.042From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035328.054From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038139.001From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
174.986From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
233.438From_analysisRNASeq.briggsae.WBls:0000038.control_median
243.598From_analysisRNASeq.briggsae.WBls:0000038.control_mean
291.89From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
368.516From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:0000041352.28From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
365.987From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
366.374From_analysisRNASeq.briggsae.WBls:0000041.control_median
366.76From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
374.839From_analysisRNASeq.briggsae.WBls:0000041.control_mean
414.327From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
389.091From_analysisRNASeq.briggsae.WBls:0000041.control_mean
389.84From_analysisRNASeq.briggsae.WBls:0000041.control_median
412.92From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
422.274From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:0000063135.026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
152.818From_analysisRNASeq.briggsae.WBls:0000063.control_mean
173.696From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
176.299From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
279.07From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
161.802From_analysisRNASeq.briggsae.WBls:0000063.control_mean
174.997From_analysisRNASeq.briggsae.WBls:0000063.control_median
206.721From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:0000101245.196From_analysisRNASeq.briggsae.total_over_all_stages.control_median
245.261From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
247.408From_analysisRNASeq.briggsae.total_over_all_stages.control_median
255.456From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127710
00127711
Contained_in_operonCBOPA0544
Ortholog (30)
Paralog (31)
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans rab-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01077
Corresponding_CDS_historyCBG01077:bp194
CBG01077:bp255
Corresponding_transcriptCBG01077.1
Other_sequence (118)
Experimental_infoExpr_patternExpr1060598
Microarray_resultsGPL8303_CB6_WBGene00024362_A
GPL14143_CBG01077_304-363_0.957_1_B
GPL14143_CBG01077_352-411_0.876_13_A
GPL14143_CBG01077_571-630_0.938_3_C
MethodGene