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WormBase Tree Display for Gene: WBGene00024253

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Name Class

WBGene00024253SMapS_parentSequencecb25.fpc0022b
IdentityVersion2
NameCGC_nameCbr-exc-7From_analysisInferred_from_orthology
Sequence_nameCBG00948
Molecular_nameCBG00948a
CBG00948a.1
CBP00250
CBG00948b
CBG00948b.1
Other_nameCBG_00948Accession_evidenceNDBHE600951
Public_nameCbr-exc-7
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:53WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-exc-7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classexc
AlleleWBVar00043447
WBVar00043407
WBVar00043427
WBVar00043442
RNASeq_FPKMWBls:000000210.8349From_analysisRNASeq.briggsae.WBls:0000002.control_mean
17.0146From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
7.29714From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
8.19296From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
10.0509From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.69897From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
7.94596From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.751627From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.60587From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
4.46011From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.9053From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
2.37235From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000425.2886From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
26.025From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
26.7613From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
23.8297From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
28.9124From_analysisRNASeq.briggsae.WBls:0000004.control_mean
30.2598From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
38.4226From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002710.3497From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
12.4397From_analysisRNASeq.briggsae.WBls:0000027.control_mean
24.0697From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.89965From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
16.3203From_analysisRNASeq.briggsae.WBls:0000027.control_mean
17.2097From_analysisRNASeq.briggsae.WBls:0000027.control_median
27.9621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003522.6178From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.8114From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
12.3149From_analysisRNASeq.briggsae.WBls:0000038.control_median
13.8185From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
14.2503From_analysisRNASeq.briggsae.WBls:0000038.control_mean
26.7447From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.62651From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004111.7194From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.70484From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
4.39198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
4.48182From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.57166From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
6.09697From_analysisRNASeq.briggsae.WBls:0000041.control_mean
10.4445From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
6.71396From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.28144From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.85627From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000632.24809From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.70499From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.63381From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.68315From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.96636From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.56177From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
3.65848From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.04549From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.44111From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010111.0728From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.19296From_analysisRNASeq.briggsae.total_over_all_stages.control_median
12.4982From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
9.60299From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00127585
00127586
00127587
Ortholog (35)
Paralog (12)
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Predicted to be part of ribonucleoprotein complex. Is an ortholog of C. elegans exc-7. In C. elegans, exc-7 is involved in several processes, including epithelial cell development; regulation of alternative mRNA splicing, via spliceosome; and regulation of neuron differentiation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG00948a
CBG00948b
Corresponding_CDS_historyCBG00948:bp194
CBG00948:bp255
Corresponding_transcriptCBG00948a.1
CBG00948b.1
Other_sequence (33)
Experimental_infoExpr_patternExpr1061129
Microarray_resultsGPL8303_CB6_WBGene00024253_A
GPL8303_CB6_WBGene00024253_B
GPL14143_CBG00948_1626-1685_0.798_9_C
GPL14143_CBG00948_1833-1892_0.626_149_A
GPL14143_CBG00948_1915-1974_0.774_32_B
MethodGene