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WormBase Tree Display for Gene: WBGene00024063

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Name Class

WBGene00024063SMapS_parentSequencecb25.fpc0011c
IdentityVersion2
NameCGC_nameCbr-col-76From_analysisInferred_from_orthology
Sequence_nameCBG00716
Molecular_nameCBG00716
CBG00716.1
CBP46229
Other_nameCBG_00716Accession_evidenceNDBHE600999
Public_nameCbr-col-76
DB_infoDatabaseNDBlocus_tagCBG_00716
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:53WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-col-76
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcol
AlleleWBVar00135612
WBVar00135613
WBVar00135614
RNASeq_FPKMWBls:000000211.7026From_analysisRNASeq.briggsae.WBls:0000002.control_mean
13.4022From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
19.4063From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.29917From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
10.093From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.26425From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
9.33323From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000311.2365From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
18.3312From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
25.4258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
15.5374From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
17.3999From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004153.355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
159.704From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
166.054From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
154.845From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
160.228From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
164.548From_analysisRNASeq.briggsae.WBls:0000004.control_mean
188.257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002711.782From_analysisRNASeq.briggsae.WBls:0000027.control_mean
23.7298From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.99239From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
7.62384From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
13.9675From_analysisRNASeq.briggsae.WBls:0000027.control_mean
14.074From_analysisRNASeq.briggsae.WBls:0000027.control_median
20.5241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003533.1665From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.5389From_analysisRNASeq.briggsae.WBls:0000038.control_median
12.5217From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
14.0063From_analysisRNASeq.briggsae.WBls:0000038.control_mean
27.6243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
7.32321From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
8.55611From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000411.635From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.78056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.26441From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.74826From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.52249From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.92613From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.64937From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
2.69882From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.6924From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.41511From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000633.06716From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.75079From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.969From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.1646From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.4655From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.37595From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.0668From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.74896From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.16626From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010120.9762From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.55611From_analysisRNASeq.briggsae.total_over_all_stages.control_median
30.7157From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
9.83646From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00127404
Ortholog (17)
Paralog (155)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-76.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG00716
Corresponding_CDS_historyCBG00716:bp194
CBG00716:bp255
Corresponding_transcriptCBG00716.1
Other_sequence (11)
Experimental_infoExpr_patternExpr1068786
Microarray_resultsGPL8303_CB6_WBGene00024063_A
GPL8303_CB6_WBGene00024063_B
GPL14143_CBG00716_1122-1181_0.787_23_B
GPL14143_CBG00716_1291-1350_0.810_6_C
GPL14143_CBG00716_1450-1509_0.695_98_A
MethodGene