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WormBase Tree Display for Gene: WBGene00023796

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Name Class

WBGene00023796SMapS_parentSequencecb25.fpc0010b
IdentityVersion1
NameSequence_nameCBG00404
Molecular_nameCBG00404
CBG00404.1
CBP00111
Other_nameCBG_00404Accession_evidenceNDBHE600968
Public_nameCBG00404
DB_infoDatabaseNDBlocus_tagCBG_00404
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:53WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000221.0942From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
24.6048From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
35.5114From_analysisRNASeq.briggsae.WBls:0000002.control_mean
60.8352From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
29.7278From_analysisRNASeq.briggsae.WBls:0000002.control_median
34.8509From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
35.3463From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000318.928From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
24.1395From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
29.3511From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
17.5293From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
21.9361From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000425.765From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
28.2155From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
30.6659From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
25.6503From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
29.9394From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
30.009From_analysisRNASeq.briggsae.WBls:0000004.control_mean
38.0242From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002717.6377From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.77686From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
45.7515From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.38479From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
10.3798From_analysisRNASeq.briggsae.WBls:0000027.control_median
15.3749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
17.072From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003523.566From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003814.6727From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
16.0807From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
20.2377From_analysisRNASeq.briggsae.WBls:0000038.control_median
24.3947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
27.7957From_analysisRNASeq.briggsae.WBls:0000038.control_mean
56.0349From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004122.9327From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
36.1823From_analysisRNASeq.briggsae.WBls:0000041.control_mean
37.2323From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
38.2837From_analysisRNASeq.briggsae.WBls:0000041.control_median
39.3351From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
45.2292From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
25.3964From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
28.7426From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
32.9874From_analysisRNASeq.briggsae.WBls:0000041.control_median
33.1447From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006325.5483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
33.0702From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
33.2056From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
34.4621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
36.8676From_analysisRNASeq.briggsae.WBls:0000063.control_mean
58.0518From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
26.7895From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
33.1379From_analysisRNASeq.briggsae.WBls:0000063.control_median
35.1879From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010129.3511From_analysisRNASeq.briggsae.total_over_all_stages.control_median
30.6277From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
27.7661From_analysisRNASeq.briggsae.total_over_all_stages.control_median
29.75From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Contained_in_operonCBOPA0014
Ortholog (26)
Structured_descriptionAutomated_descriptionIs affected by Cbr-spr-4 based on RNA-seq studies. Is an ortholog of C. elegans C30H6.9.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG00404
Corresponding_CDS_historyCBG00404:bp194
Corresponding_transcriptCBG00404.1
Other_sequence (16)
Experimental_infoExpr_patternExpr1069462
Microarray_resultsGPL8303_CB6_WBGene00023796_A
GPL8303_CB6_WBGene00023796_B
GPL8303_CB6_WBGene00023796_C
GPL14143_CBG00404_280-339_0.942_1_B
GPL14143_CBG00404_441-500_0.893_16_C
GPL14143_CBG00404_488-547_0.911_9_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene