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WormBase Tree Display for Gene: WBGene00023533

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Name Class

WBGene00023533SMapS_parentSequencecb25.fpc0002
IdentityVersion2
NameCGC_nameCbr-lin-13From_analysisInferred_from_orthology
Sequence_nameCBG00018
Molecular_nameCBG00018
CBG00018.1
CBP38222
Other_nameCBG_00018Accession_evidenceNDBHE601477
Public_nameCbr-lin-13
DB_infoDatabaseNDBlocus_tagCBG_00018
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:53WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-lin-13
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlin
RNASeq_FPKMWBls:000000213.7803From_analysisRNASeq.briggsae.WBls:0000002.control_mean
15.9586From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
22.8147From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.56762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
15.4369From_analysisRNASeq.briggsae.WBls:0000002.control_mean
18.1827From_analysisRNASeq.briggsae.WBls:0000002.control_median
20.4068From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000361.6589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
68.8195From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
75.9802From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
100.7From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
79.4464From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000433.1583From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
34.4964From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
35.8345From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
34.667From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
35.0045From_analysisRNASeq.briggsae.WBls:0000004.control_mean
35.5451From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
35.8178From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:000002710.7392From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.24724From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
7.37161From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.1284From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
15.6336From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
9.4338From_analysisRNASeq.briggsae.WBls:0000027.control_median
9.43711From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003517.5599From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.3643From_analysisRNASeq.briggsae.WBls:0000038.control_median
10.7717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
12.9398From_analysisRNASeq.briggsae.WBls:0000038.control_mean
21.2788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
9.75187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
9.95688From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004124.2321From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
32.2988From_analysisRNASeq.briggsae.WBls:0000041.control_mean
33.6023From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
34.5301From_analysisRNASeq.briggsae.WBls:0000041.control_median
35.4579From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
35.9027From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
15.6262From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
21.7377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
27.7598From_analysisRNASeq.briggsae.WBls:0000041.control_mean
28.9172From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006324.7699From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
25.5943From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
26.1098From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
26.4186From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
26.4499From_analysisRNASeq.briggsae.WBls:0000063.control_mean
29.357From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
21.6356From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
25.6475From_analysisRNASeq.briggsae.WBls:0000063.control_mean
25.8521From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010121.2788From_analysisRNASeq.briggsae.total_over_all_stages.control_median
22.086From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
21.6866From_analysisRNASeq.briggsae.total_over_all_stages.control_median
24.7964From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (35)
ParalogWBGene00035006Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038709Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040731Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: Zinc finger C2H2-type. Is an ortholog of C. elegans lin-13. In C. elegans, lin-13 is involved in negative regulation of vulval development and reproduction.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG00018
Corresponding_CDS_historyCBG00018:bp255
Corresponding_transcriptCBG00018.1
Other_sequenceGT571564.1
CR06434
CRC03619_1
CR03444
CRC03527_1
Experimental_infoExpr_patternExpr1064964
Microarray_resultsGPL8303_CB6_WBGene00023533_A
GPL8303_CB6_WBGene00023533_B
GPL14143_CBG00018_5934-5993_0.894_12_C
GPL14143_CBG00018_6014-6073_0.706_407_B
GPL14143_CBG00018_6181-6240_0.876_16_A
MethodGene