WormBase Tree Display for Gene: WBGene00023419
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WBGene00023419 | SMap | S_parent | Sequence | F53F4 | ||||
---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | ||||||
Name | Sequence_name | F53F4.16 | ||||||
Molecular_name | F53F4.16 | |||||||
F53F4.16.1 | ||||||||
CE36935 | ||||||||
Other_name | CELE_F53F4.16 | Accession_evidence | NDB | BX284605 | ||||
Public_name | F53F4.16 | |||||||
DB_info | Database | AceView | gene | 5O100 | ||||
WormFlux | gene | WBGene00023419 | ||||||
NDB | locus_tag | CELE_F53F4.16 | ||||||
NCBI | gene | 259656 | ||||||
RefSeq | protein | NM_001028792.5 | ||||||
TrEMBL | UniProtAcc | Q6BES8 | ||||||
UniProt_GCRP | UniProtAcc | Q6BES8 | ||||||
Species | Caenorhabditis elegans | |||||||
History | Version_change | 1 | 05 Jul 2004 16:42:22 | WBPerson1846 | Event | Created | ||
Status | Live | |||||||
Gene_info | Biotype | SO:0001217 | ||||||
Allele (14) | ||||||||
RNASeq_FPKM (74) | ||||||||
Contained_in_operon | CEOP5392 | |||||||
Ortholog | WBGene00052841 | Caenorhabditis remanei | From_analysis | OMA | ||||
Inparanoid_8 | ||||||||
WormBase-Compara | ||||||||
WBGene00143554 | Caenorhabditis brenneri | From_analysis | OMA | |||||
Inparanoid_8 | ||||||||
WormBase-Compara | ||||||||
WBGene00249810 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | |||||
FL83_03778 | Caenorhabditis latens | From_analysis | WormBase-Compara | |||||
Sp34_50164410 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | |||||
Structured_description | Automated_description | Enriched in several structures, including body wall muscle cell; germ line; intestine; marginal cell; and sensory neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including hsf-1; let-7; and gld-1 based on RNA-seq; microarray; and proteomic studies. Is affected by seven chemicals including hydrogen sulfide; rotenone; and Rifampin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | |||||||
WBPerson37462 | ||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
Molecular_info | Corresponding_CDS | F53F4.16 | ||||||
Corresponding_transcript | F53F4.16.1 | |||||||
Associated_feature | WBsf234833 | |||||||
Experimental_info | Expr_pattern | Expr1019993 | ||||||
Expr1040132 | ||||||||
Expr1151962 | ||||||||
Expr2004077 | ||||||||
Expr2022301 | ||||||||
Drives_construct | WBCnstr00023878 | |||||||
Construct_product | WBCnstr00023878 | |||||||
Microarray_results (13) | ||||||||
Expression_cluster (76) | ||||||||
Map_info | Positive | Positive_clone | F53F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Interpolated_map_position | V | 5.53327 | ||||||
Reference | WBPaper00061547 | |||||||
Method | Gene |