WormBase Tree Display for Gene: WBGene00023405
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| WBGene00023405 | SMap | S_parent | Sequence | ZK1236 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | sor-1 | Person_evidence | WBPerson716 | |||||
| Sequence_name | ZK1236.3 | ||||||||
| Molecular_name | ZK1236.3a | ||||||||
| ZK1236.3a.1 | |||||||||
| CE54192 | |||||||||
| ZK1236.3b | |||||||||
| CE40223 | |||||||||
| ZK1236.3b.1 | |||||||||
| Other_name | phi-57 | Person_evidence | WBPerson2582 | ||||||
| CELE_ZK1236.3 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | sor-1 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00023405 | |||||
| WormFlux | gene | WBGene00023405 | |||||||
| NDB | locus_tag | CELE_ZK1236.3 | |||||||
| NCBI | gene | 176189 | |||||||
| RefSeq | protein | NM_001379831.2 | |||||||
| NM_001047429.2 | |||||||||
| SwissProt | UniProtAcc | P34619 | |||||||
| UniProt_GCRP | UniProtAcc | P34619 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 10 Jun 2004 10:09:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 Mar 2005 13:54:35 | WBPerson2970 | Name_change | Other_name | phi-57 | ||||
| 3 | 04 Apr 2006 10:01:40 | WBPerson2970 | Name_change | CGC_name | sor-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sor | ||||||||
| Allele (56) | |||||||||
| Strain | WBStrain00008582 | ||||||||
| WBStrain00008583 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00043549 | ||||||||
| 00043550 | |||||||||
| 00043551 | |||||||||
| 00043552 | |||||||||
| 00043553 | |||||||||
| 00043554 | |||||||||
| 00043555 | |||||||||
| 00043556 | |||||||||
| 00043557 | |||||||||
| 00043558 | |||||||||
| Ortholog | WBGene00062966 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||
| WBGene00191108 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
| Csp11.Scaffold571.g4271 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| Sp34_30080700 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrIII_pilon.g8400 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00137583 | Caenorhabditis japonica | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enables RNA binding activity. Involved in epigenetic regulation of gene expression. Located in nuclear speck. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK1236.3a | |||||||
| ZK1236.3b | |||||||||
| Corresponding_CDS_history | ZK1236.3:wp157 | ||||||||
| ZK1236.3a:wp275 | |||||||||
| Corresponding_transcript | ZK1236.3a.1 | ||||||||
| ZK1236.3b.1 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result (32) | ||||||||
| Expr_pattern | Expr12373 | ||||||||
| Expr12374 | |||||||||
| Expr1017993 | |||||||||
| Expr1040127 | |||||||||
| Expr1162585 | |||||||||
| Expr2016007 | |||||||||
| Expr2034242 | |||||||||
| Drives_construct | WBCnstr00020807 | ||||||||
| WBCnstr00023885 | |||||||||
| Construct_product | WBCnstr00020807 | ||||||||
| WBCnstr00023885 | |||||||||
| Antibody | WBAntibody00001062 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (110) | |||||||||
| Interaction (56) | |||||||||
| Map_info | Map | III | Position | -0.262167 | Error | 0.000476 | |||
| Positive | Positive_clone | ZK1236 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5685 | |||||||
| 5724 | |||||||||
| Reference | WBPaper00025725 | ||||||||
| WBPaper00027128 | |||||||||
| WBPaper00031224 | |||||||||
| WBPaper00031782 | |||||||||
| WBPaper00038372 | |||||||||
| WBPaper00061452 | |||||||||
| Method | Gene |
