WormBase Tree Display for Gene: WBGene00022880
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WBGene00022880 | SMap | S_parent | Sequence | ZK1248 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | tbc-2 | Person_evidence | WBPerson524 | |||||
WBPerson293 | |||||||||
Sequence_name | ZK1248.10 | ||||||||
Molecular_name | ZK1248.10 | ||||||||
ZK1248.10.1 | |||||||||
CE29155 | |||||||||
Other_name | CELE_ZK1248.10 | Accession_evidence | NDB | BX284602 | |||||
Public_name | tbc-2 | ||||||||
DB_info | Database | AceView | gene | 2G114 | |||||
WormQTL | gene | WBGene00022880 | |||||||
WormFlux | gene | WBGene00022880 | |||||||
NDB | locus_tag | CELE_ZK1248.10 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00022880|UniProtKB=Q23419 | |||||||
family | PTHR22957 | ||||||||
NCBI | gene | 173986 | |||||||
RefSeq | protein | NM_062755.9 | |||||||
TREEFAM | TREEFAM_ID | TF317336 | |||||||
TrEMBL | UniProtAcc | Q23419 | |||||||
UniProt_GCRP | UniProtAcc | Q23419 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 23 Jun 2008 18:34:24 | WBPerson2970 | Name_change | CGC_name | tbc-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | tbc | ||||||||
Allele (51) | |||||||||
Strain | WBStrain00031265 | ||||||||
WBStrain00047446 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (14) | |||||||||
Contained_in_operon | CEOP2224 | ||||||||
Ortholog (43) | |||||||||
Paralog (17) | |||||||||
Structured_description | Automated_description | Enables GTPase activator activity. Involved in positive regulation of early endosome to late endosome transport and regulation of presynaptic dense core granule exocytosis. Located in cholinergic synapse and late endosome. Expressed in gonadal sheath cell; hypodermis; intestine; and pharyngeal muscle cell. Is an ortholog of human TBC1D2 (TBC1 domain family member 2). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | ZK1248.10 | |||||||
Corresponding_transcript | ZK1248.10.1 | ||||||||
Other_sequence (29) | |||||||||
Associated_feature | WBsf650095 | ||||||||
WBsf665558 | |||||||||
WBsf223102 | |||||||||
WBsf223103 | |||||||||
Experimental_info | RNAi_result | WBRNAi00077887 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00076877 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00007639 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00059181 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021842 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr8740 | ||||||||
Expr9042 | |||||||||
Expr12475 | |||||||||
Expr1027382 | |||||||||
Expr1040120 | |||||||||
Expr1162600 | |||||||||
Expr2017331 | |||||||||
Expr2035467 | |||||||||
Drives_construct | WBCnstr00005656 | ||||||||
WBCnstr00023899 | |||||||||
Construct_product | WBCnstr00005656 | ||||||||
WBCnstr00005658 | |||||||||
WBCnstr00006147 | |||||||||
WBCnstr00006148 | |||||||||
WBCnstr00023899 | |||||||||
Microarray_results (20) | |||||||||
Expression_cluster (116) | |||||||||
Interaction (53) | |||||||||
Map_info | Map | II | Position | -0.904826 | Error | 0.004151 | |||
Positive | Positive_clone | ZK1248 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (26) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |