WormBase Tree Display for Gene: WBGene00022858
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WBGene00022858 | SMap | S_parent | Sequence | ZK1193 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | Sequence_name | ZK1193.2 | |||||||
Molecular_name | ZK1193.2a | ||||||||
ZK1193.2a.1 | |||||||||
CE51973 | |||||||||
ZK1193.2b | |||||||||
CE52035 | |||||||||
ZK1193.2b.1 | |||||||||
ZK1193.2b.2 | |||||||||
ZK1193.2b.3 | |||||||||
Other_name | CELE_ZK1193.2 | Accession_evidence | NDB | BX284606 | |||||
Public_name | ZK1193.2 | ||||||||
DB_info | Database | AceView | gene | XB26 | |||||
WormQTL | gene | WBGene00022858 | |||||||
WormFlux | gene | WBGene00022858 | |||||||
NDB | locus_tag | CELE_ZK1193.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00022858|UniProtKB=A0A1X7RBP4 | |||||||
family | PTHR47324 | ||||||||
NCBI | gene | 180396 | |||||||
RefSeq | protein | NM_001351873.3 | |||||||
NM_001392714.1 | |||||||||
TrEMBL | UniProtAcc | A0A1X7RBR0 | |||||||
A0A1X7RBP4 | |||||||||
UniProt_GCRP | UniProtAcc | A0A1X7RBP4 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 28 Apr 2017 01:35:57 | WBPerson1983 | Event | Acquires_merge | WBGene00022859 | ||||
3 | 28 Apr 2017 01:35:57 | WBPerson1983 | Event | Acquires_merge | WBGene00022860 | ||||
Acquires_merge | WBGene00022859 | ||||||||
WBGene00022860 | |||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (295) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (20) | |||||||||
Paralog (23) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ABplpppaaa; ABprpppaaa; gonadal sheath cell; neurons; and retrovesicular ganglion based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; proteomic; and RNA-seq studies. Is affected by twenty-five chemicals including Ethanol; methylmercuric chloride; and Mercuric Chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: von Willebrand factor A-like domain superfamily; von Willebrand factor, type A; and von Willebrand factor type A domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | ZK1193.2a | |||||||
ZK1193.2b | |||||||||
Corresponding_CDS_history | ZK1193.2:wp259 | ||||||||
Corresponding_transcript | ZK1193.2a.1 | ||||||||
ZK1193.2b.1 | |||||||||
ZK1193.2b.2 | |||||||||
ZK1193.2b.3 | |||||||||
Other_sequence | CRC05726_1 | ||||||||
Associated_feature (8) | |||||||||
Experimental_info | RNAi_result | WBRNAi00016058 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00059152 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00059151 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021830 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021829 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021828 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00059153 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00066622 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00038168 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1019017 | ||||||||
Expr1021021 | |||||||||
Expr1024343 | |||||||||
Expr1162572 | |||||||||
Expr1162573 | |||||||||
Expr1162574 | |||||||||
Expr2008722 | |||||||||
Expr2026956 | |||||||||
Drives_construct | WBCnstr00023914 | ||||||||
WBCnstr00023915 | |||||||||
Construct_product (2) | |||||||||
Microarray_results (49) | |||||||||
Expression_cluster (250) | |||||||||
Interaction | WBInteraction000258238 | ||||||||
WBInteraction000386468 | |||||||||
WBInteraction000420708 | |||||||||
WBInteraction000543555 | |||||||||
WBInteraction000585381 | |||||||||
Map_info | Positive | Positive_clone | ZK1193 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | -19.9198 | |||||||
Reference | WBPaper00033118 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00065331 | |||||||||
Method | Gene |