WormBase Tree Display for Gene: WBGene00022855
expand all nodes | collapse all nodes | view schema
WBGene00022855 | SMap | S_parent | Sequence | ZK1127 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | tcer | ||||||
Allele (47) | |||||||
Strain | WBStrain00004897 | ||||||
WBStrain00004899 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00083443 | ||||||
00083444 | |||||||
00083445 | |||||||
00087975 | |||||||
00087976 | |||||||
00126826 | |||||||
Ortholog (39) | |||||||
Paralog | WBGene00022853 | Caenorhabditis elegans | From_analysis | Panther | |||
Structured_description | Automated_description | Predicted to enable RNA polymerase binding activity and transcription coregulator activity. Predicted to be involved in regulation of DNA-templated transcription. Located in nuclear periphery. Expressed in several structures, including germ cell; gonad; hypodermal cell; intestinal cell; and somatic cell. Is an ortholog of human TCERG1 (transcription elongation regulator 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | ZK1127.9a | |||||
ZK1127.9b | |||||||
ZK1127.9c | |||||||
ZK1127.9d | |||||||
Corresponding_CDS_history | ZK1127.9e:wp274 | ||||||
Corresponding_transcript (7) | |||||||
Other_sequence (61) | |||||||
Associated_feature | WBsf650203 | ||||||
WBsf223279 | |||||||
Experimental_info | RNAi_result (33) | ||||||
Expr_pattern | Expr7190 | ||||||
Expr10747 | |||||||
Expr12818 | |||||||
Expr1040111 | |||||||
Expr1162561 | |||||||
Expr2017362 | |||||||
Expr2035499 | |||||||
Drives_construct (11) | |||||||
Construct_product (12) | |||||||
Regulate_expr_cluster | WBPaper00049217:TCER-1_downregulated | ||||||
WBPaper00049217:TCER-1_upregulated | |||||||
Antibody | WBAntibody00001520 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (92) | |||||||
Interaction (40) | |||||||
Map_info | Map | II | Position | 0.349925 | Error | 0.00503 | |
Positive | Positive_clone | ZK1127 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (28) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |