WormBase Tree Display for Gene: WBGene00022835

WBGene00022835 SMap: S_parent: Sequence: ZK973
  Identity: Version: 1
    Name: Sequence_name: ZK973.9
      Molecular_name: ZK973.9
        ZK973.9.1
        CE23479
      Other_name: CELE_ZK973.9 Accession_evidence: NDB BX284601
      Public_name: ZK973.9
    DB_info: Database: AceView gene 1E938
        WormQTL gene WBGene00022835
        WormFlux gene WBGene00022835
        NDB locus_tag CELE_ZK973.9
        Panther gene CAEEL|WormBase=WBGene00022835|UniProtKB=Q9N4L9
          family PTHR23107
        NCBI gene 172036
        RefSeq protein NM_058957.6
        TREEFAM TREEFAM_ID TF318722
        TrEMBL UniProtAcc Q9N4L9
        UniProt_GCRP UniProtAcc Q9N4L9
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:06 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (28)
    Strain: WBStrain00037027
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP1176
    Ortholog (28)
    Structured_description: Automated_description: Enriched in several structures, including ABplaapappp; ABpraapappp; NSM; germ line; and head ganglion based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on tiling array; RNA-seq; proteomic; and microarray studies. Is affected by seven chemicals including rotenone; stavudine; and Zidovudine based on RNA-seq and microarray studies. Human ortholog(s) of this gene implicated in synovial sarcoma. Human SS18 enables nuclear receptor coactivator activity. Is predicted to encode a protein with the following domains: SS18, N-terminal and SSXT protein (N-terminal region). Is an ortholog of human SS18 (SS18 subunit of BAF chromatin remodeling complex) and SS18L1 (SS18L1 subunit of BAF chromatin remodeling complex). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:5485 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11340)
  Molecular_info: Corresponding_CDS: ZK973.9
    Corresponding_transcript: ZK973.9.1
    Other_sequence: CBC11926_1
    Associated_feature: WBsf664136
      WBsf219262
      WBsf219263
      WBsf219264
      WBsf219265
      WBsf219266
  Experimental_info: RNAi_result: WBRNAi00038522 Inferred_automatically: RNAi_primary
      WBRNAi00004958 Inferred_automatically: RNAi_primary
      WBRNAi00059877 Inferred_automatically: RNAi_primary
      WBRNAi00061975 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024032
      Expr1040102
      Expr1163300
      Expr2009044
      Expr2027279
    Drives_construct: WBCnstr00023933
    Construct_product: WBCnstr00023933
    Microarray_results (17)
    Expression_cluster (117)
    Interaction: WBInteraction000167026
      WBInteraction000387940
      WBInteraction000547659
      WBInteraction000548386
      WBInteraction000548511
      WBInteraction000561194
      WBInteraction000561290
      WBInteraction000561477
      WBInteraction000575307
      WBInteraction000577236
  Map_info: Positive: Positive_clone: ZK973 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I -1.39571
  Reference: WBPaper00030887
    WBPaper00038491
    WBPaper00055090
    WBPaper00065308
  Method: Gene