WormBase Tree Display for Gene: WBGene00022815
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| WBGene00022815 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | asic-1 | Person_evidence | WBPerson649 | |||||
| Sequence_name | ZK770.1 | ||||||||
| Molecular_name | ZK770.1 | ||||||||
| ZK770.1.1 | |||||||||
| CE45595 | |||||||||
| Other_name | CELE_ZK770.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | asic-1 | ||||||||
| DB_info | Database | AceView | gene | 1E341 | |||||
| WormQTL | gene | WBGene00022815 | |||||||
| WormFlux | gene | WBGene00022815 | |||||||
| NDB | locus_tag | CELE_ZK770.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022815|UniProtKB=O01635 | |||||||
| family | PTHR11690 | ||||||||
| NCBI | gene | 191422 | |||||||
| RefSeq | protein | NM_058813.5 | |||||||
| SwissProt | UniProtAcc | O01635 | |||||||
| UniProt_GCRP | UniProtAcc | O01635 | |||||||
| OMIM | gene | 600760 | |||||||
| 600761 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 01 Apr 2005 11:05:24 | WBPerson2970 | Name_change | CGC_name | asic-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | asic | ||||||||
| Allele (63) | |||||||||
| Strain | WBStrain00022710 | ||||||||
| WBStrain00022722 | |||||||||
| WBStrain00022723 | |||||||||
| WBStrain00022724 | |||||||||
| WBStrain00031418 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (20) | |||||||||
| Ortholog (48) | |||||||||
| Paralog (30) | |||||||||
| Structured_description | Automated_description | Predicted to enable acid-sensing ion channel activity. Involved in positive regulation of dopamine secretion. Predicted to be located in plasma membrane. Expressed in XXX cell and neurons. Human ortholog(s) of this gene implicated in bronchiectasis (multiple) and renal tubular transport disease (multiple). Is an ortholog of human SCNN1B (sodium channel epithelial 1 subunit beta); SCNN1D (sodium channel epithelial 1 subunit delta); and SCNN1G (sodium channel epithelial 1 subunit gamma). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080526 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10600) | ||||
| DOID:0050477 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10600,HGNC:10602) | ||||||
| DOID:4479 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10600,HGNC:10602) | ||||||
| DOID:0080528 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10602) | ||||||
| Molecular_info | Corresponding_CDS | ZK770.1 | |||||||
| Corresponding_CDS_history | ZK770.1:wp156 | ||||||||
| ZK770.1:wp221 | |||||||||
| Corresponding_transcript | ZK770.1.1 | ||||||||
| Other_sequence | HBC19506_1 | ||||||||
| HS01293 | |||||||||
| HSC00860_1 | |||||||||
| JI232694.1 | |||||||||
| Acan_isotig11046 | |||||||||
| ES739302.1 | |||||||||
| JI179095.1 | |||||||||
| EX555021.1 | |||||||||
| Associated_feature | WBsf983234 | ||||||||
| WBsf983235 | |||||||||
| WBsf983236 | |||||||||
| WBsf983237 | |||||||||
| WBsf983238 | |||||||||
| WBsf217428 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00059708 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00107934 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004943 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11819 | ||||||||
| Expr11820 | |||||||||
| Expr15909 | |||||||||
| Expr16352 | |||||||||
| Expr1019087 | |||||||||
| Expr1163125 | |||||||||
| Expr2009452 | |||||||||
| Expr2027689 | |||||||||
| Drives_construct (11) | |||||||||
| Construct_product | WBCnstr00008368 | ||||||||
| WBCnstr00009838 | |||||||||
| WBCnstr00019473 | |||||||||
| WBCnstr00019474 | |||||||||
| WBCnstr00021730 | |||||||||
| WBCnstr00021731 | |||||||||
| WBCnstr00023951 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (108) | |||||||||
| Interaction (14) | |||||||||
| Anatomy_function | WBbtf0885 | ||||||||
| Map_info | Map | I | Position | -2.63522 | Error | 0.013324 | |||
| Positive | Positive_clone | ZK770 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5116 | |||||||
| 4446 | |||||||||
| 4637 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (24) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
