WormBase Tree Display for Gene: WBGene00022631
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| WBGene00022631 | SMap | S_parent | Sequence | ZC581 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | nekl-2 | Person_evidence | WBPerson353 | |||||
| Sequence_name | ZC581.1 | ||||||||
| Molecular_name | ZC581.1 | ||||||||
| ZC581.1.1 | |||||||||
| CE15235 | |||||||||
| Other_name | phi-35 | Person_evidence | WBPerson2582 | ||||||
| CELE_ZC581.1 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | nekl-2 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 Mar 2005 13:54:35 | WBPerson2970 | Name_change | Other_name | phi-35 | ||||
| 3 | 16 Feb 2007 14:39:36 | WBPerson2970 | Name_change | CGC_name | nekl-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nekl | ||||||||
| Allele (30) | |||||||||
| Strain | WBStrain00036830 | ||||||||
| WBStrain00036864 | |||||||||
| WBStrain00037462 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00015376 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00021461 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00008956 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00013694 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00017033 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020324 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | nekl-2 encodes a putative serine/threonine protein kinase orthologousto Aspergillus nidulans nimA and human NEK8 (OMIM:609799), andparalogous to C. elegans D1044.3, D1044.8, F19H6.1, and Y39G10AR.3;nekl-2 interacts with two or more components of the EGF/RAS signallingpathway, and is required for such signalling in vulval development. | Paper_evidence | WBPaper00027756 | |||||
| WBPaper00028846 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 13 Dec 2006 00:00:00 | ||||||||
| Automated_description | Predicted to enable ion binding activity and protein kinase activity. Involved in molting cycle and positive regulation of endocytosis. Predicted to be located in cytoplasm. Expressed in hyp7 syncytium. Is an ortholog of human NEK3 (NIMA related kinase 3). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZC581.1 | |||||||
| Corresponding_transcript | ZC581.1.1 | ||||||||
| Other_sequence (24) | |||||||||
| Associated_feature | WBsf643393 | ||||||||
| WBsf217871 | |||||||||
| WBsf217872 | |||||||||
| Experimental_info | RNAi_result (26) | ||||||||
| Expr_pattern | Expr12111 | ||||||||
| Expr15100 | |||||||||
| Expr1023880 | |||||||||
| Expr1039999 | |||||||||
| Expr1162440 | |||||||||
| Expr2013953 | |||||||||
| Expr2032192 | |||||||||
| Drives_construct | WBCnstr00020196 | ||||||||
| WBCnstr00024095 | |||||||||
| Construct_product | WBCnstr00020196 | ||||||||
| WBCnstr00024095 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (128) | |||||||||
| Interaction (32) | |||||||||
| Map_info | Map | I | Position | 1.28369 | Error | 0.002544 | |||
| Positive | Positive_clone | ZC581 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (20) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
