WormBase Tree Display for Gene: WBGene00022546
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| WBGene00022546 | SMap | S_parent | Sequence | ZC196 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | ZC196.2 | |||||||
| Molecular_name | ZC196.2 | ||||||||
| ZC196.2.1 | |||||||||
| CE47685 | |||||||||
| Other_name | CELE_ZC196.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ZC196.2 | ||||||||
| DB_info | Database | AceView | gene | 5J215 | |||||
| WormQTL | gene | WBGene00022546 | |||||||
| WormFlux | gene | WBGene00022546 | |||||||
| NDB | locus_tag | CELE_ZC196.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022546|UniProtKB=O01630 | |||||||
| family | PTHR10809 | ||||||||
| NCBI | gene | 191101 | |||||||
| RefSeq | protein | NM_072850.4 | |||||||
| TrEMBL | UniProtAcc | O01630 | |||||||
| UniProt_GCRP | UniProtAcc | O01630 | |||||||
| OMIM | gene | 605704 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (47) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00025179 | ||||||||
| 00025180 | |||||||||
| 00025181 | |||||||||
| 00025182 | |||||||||
| 00025183 | |||||||||
| 00025184 | |||||||||
| Ortholog (34) | |||||||||
| Paralog (42) | |||||||||
| Structured_description | Automated_description | Predicted to enable FFAT motif binding activity. Predicted to be involved in endoplasmic reticulum membrane organization and endoplasmic reticulum-plasma membrane tethering. Predicted to be located in endoplasmic reticulum membrane and plasma membrane. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis type 8 and autosomal dominant adult-onset proximal spinal muscular atrophy. Is an ortholog of human VAPA (VAMP associated protein A) and VAPB (VAMP associated protein B and C). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:12377 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12649) | ||||
| DOID:332 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12649) | ||||||
| DOID:0111194 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12649) | ||||||
| DOID:0050752 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12649) | ||||||
| Molecular_info | Corresponding_CDS | ZC196.2 | |||||||
| Corresponding_CDS_history | ZC196.2:wp231 | ||||||||
| Corresponding_transcript | ZC196.2.1 | ||||||||
| Associated_feature | WBsf718360 | ||||||||
| WBsf232147 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00021596 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037972 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058771 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022782 | ||||||||
| Expr1162192 | |||||||||
| Expr2008565 | |||||||||
| Expr2026803 | |||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (160) | |||||||||
| Interaction (22) | |||||||||
| Map_info | Positive | Positive_clone | ZC196 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 1.58239 | |||||||
| Method | Gene |
