WormBase Tree Display for Gene: WBGene00022488
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| WBGene00022488 | SMap | S_parent | Sequence | Y119D3B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | orc-3 | Person_evidence | WBPerson195 | |||||
| Sequence_name | Y119D3B.11 | ||||||||
| Molecular_name | Y119D3B.11 | ||||||||
| Y119D3B.11.1 | |||||||||
| CE32745 | |||||||||
| Other_name | CELE_Y119D3B.11 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | orc-3 | ||||||||
| DB_info | Database | AceView | gene | 3C301 | |||||
| WormQTL | gene | WBGene00022488 | |||||||
| WormFlux | gene | WBGene00022488 | |||||||
| NDB | locus_tag | CELE_Y119D3B.11 | |||||||
| NCBI | gene | 175286 | |||||||
| RefSeq | protein | NM_064948.7 | |||||||
| TrEMBL | UniProtAcc | Q95Y69 | |||||||
| UniProt_GCRP | UniProtAcc | Q95Y69 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 Jun 2011 16:06:01 | WBPerson2970 | Name_change | CGC_name | orc-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | orc | ||||||||
| Allele (152) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (23) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalppappa; ciliated neurons; germ line; head mesodermal cell; and male distal tip cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and glp-1 based on microarray; RNA-seq; and proteomic studies. Is affected by six chemicals including stavudine; Zidovudine; and antimycin based on RNA-seq; proteomic; and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y119D3B.11 | |||||||
| Corresponding_CDS_history | Y119D3B.11:wp88 | ||||||||
| Corresponding_transcript | Y119D3B.11.1 | ||||||||
| Other_sequence | CBC02303_1 | ||||||||
| SR01479 | |||||||||
| CGC01427_1 | |||||||||
| CBC07291_1 | |||||||||
| CR00680 | |||||||||
| CRC02859_1 | |||||||||
| Associated_feature | WBsf644942 | ||||||||
| WBsf644943 | |||||||||
| WBsf658602 | |||||||||
| WBsf991246 | |||||||||
| WBsf991247 | |||||||||
| WBsf1014190 | |||||||||
| WBsf1014191 | |||||||||
| WBsf1014192 | |||||||||
| WBsf224439 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055506 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022641 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017118 | ||||||||
| Expr1039935 | |||||||||
| Expr1159010 | |||||||||
| Expr2014635 | |||||||||
| Expr2032868 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (133) | |||||||||
| Interaction | WBInteraction000539195 | ||||||||
| WBInteraction000559563 | |||||||||
| WBInteraction000561562 | |||||||||
| WBInteraction000561567 | |||||||||
| WBInteraction000573942 | |||||||||
| WBInteraction000574322 | |||||||||
| Map_info | Map | III | Position | -22.6043 | Error | 0.004152 | |||
| Positive | Positive_clone | Y119D3B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
