WormBase Tree Display for Gene: WBGene00022484
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| WBGene00022484 | SMap | S_parent | Sequence | Y119D3B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-77 | Person_evidence | WBPerson655 | |||||
| Sequence_name | Y119D3B.6 | ||||||||
| Molecular_name | Y119D3B.6 | ||||||||
| Y119D3B.6.1 | |||||||||
| CE27463 | |||||||||
| Other_name | CELE_Y119D3B.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | fbxa-77 | ||||||||
| DB_info | Database | AceView | gene | 3C341 | |||||
| WormQTL | gene | WBGene00022484 | |||||||
| WormFlux | gene | WBGene00022484 | |||||||
| NDB | locus_tag | CELE_Y119D3B.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022484|UniProtKB=Q95Y63 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 175290 | |||||||
| RefSeq | protein | NM_064954.5 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | Q95Y63 | |||||||
| UniProt_GCRP | UniProtAcc | Q95Y63 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-77 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (78) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (34) | |||||||||
| Paralog (216) | |||||||||
| Structured_description | Automated_description | Enriched in intestine; rect_D; rect_VL; rect_VR; and rectal gland cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including methylmercuric chloride; Psoralens; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y119D3B.6 | |||||||
| Corresponding_transcript | Y119D3B.6.1 | ||||||||
| Associated_feature | WBsf644949 | ||||||||
| WBsf224441 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055522 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055523 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055524 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055526 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007318 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1159025 | ||||||||
| Expr2011575 | |||||||||
| Expr2029815 | |||||||||
| Drives_construct | WBCnstr00024209 | ||||||||
| Construct_product | WBCnstr00024209 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (98) | |||||||||
| Map_info | Map | III | Position | -22.5762 | Error | 0.001285 | |||
| Positive | Positive_clone | Y119D3B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
