WormBase Tree Display for Gene: WBGene00022367
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| WBGene00022367 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y92H12BM.1 | |||||||
| Molecular_name | Y92H12BM.1 | ||||||||
| Y92H12BM.1.1 | |||||||||
| CE53872 | |||||||||
| Other_name | CELE_Y92H12BM.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | Y92H12BM.1 | ||||||||
| DB_info | Database | AceView | gene | 1B862 | |||||
| WormQTL | gene | WBGene00022367 | |||||||
| WormFlux | gene | WBGene00022367 | |||||||
| NDB | locus_tag | CELE_Y92H12BM.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022367|UniProtKB=G4SNJ8 | |||||||
| family | PTHR45876 | ||||||||
| NCBI | gene | 190788 | |||||||
| RefSeq | protein | NM_001377633.1 | |||||||
| TrEMBL | UniProtAcc | G4SNJ8 | |||||||
| UniProt_GCRP | UniProtAcc | G4SNJ8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (79) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP1963 | ||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00022365 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00305050 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in ABplpppaaa; ABprpppaaa; AVJ; head mesodermal cell; and motor neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including skn-1; eat-2; and lin-28 based on microarray and RNA-seq studies. Is affected by six chemicals including rotenone; Rifampin; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: WW domain; Phosphorylation site; and WW domain superfamily. Is an ortholog of human ARHGAP39 (Rho GTPase activating protein 39). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y92H12BM.1 | |||||||
| Corresponding_CDS_history | Y92H12BM.1:wp178 | ||||||||
| Y92H12BM.1:wp274 | |||||||||
| Corresponding_transcript | Y92H12BM.1.1 | ||||||||
| Other_sequence | GR463917.1 | ||||||||
| CR00281 | |||||||||
| BUC01278_1 | |||||||||
| CRC08230_1 | |||||||||
| JI166526.1 | |||||||||
| DN153394.1 | |||||||||
| HBC05417_1 | |||||||||
| EL889085.1 | |||||||||
| Associated_feature | WBsf648938 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00058637 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1019378 | ||||||||
| Expr1039871 | |||||||||
| Expr1162055 | |||||||||
| Expr2008504 | |||||||||
| Expr2026742 | |||||||||
| Microarray_results (11) | |||||||||
| Expression_cluster (50) | |||||||||
| Interaction | WBInteraction000582207 | ||||||||
| WBInteraction000583810 | |||||||||
| WBInteraction000584118 | |||||||||
| Map_info | Positive | Positive_clone | Y92H12BM | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -14.6932 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
