WormBase Tree Display for Gene: WBGene00022351
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| WBGene00022351 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y82E9BR.19 | |||||||
| Molecular_name | Y82E9BR.19 | ||||||||
| Y82E9BR.19.1 | |||||||||
| CE38665 | |||||||||
| Other_name | CELE_Y82E9BR.19 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y82E9BR.19 | ||||||||
| DB_info | Database | AceView | gene | 3C580 | |||||
| WormQTL | gene | WBGene00022351 | |||||||
| WormFlux | gene | WBGene00022351 | |||||||
| NDB | locus_tag | CELE_Y82E9BR.19 | |||||||
| NCBI | gene | 190776 | |||||||
| RefSeq | protein | NM_065011.4 | |||||||
| TREEFAM | TREEFAM_ID | TF343446 | |||||||
| TrEMBL | UniProtAcc | Q3V5I5 | |||||||
| UniProt_GCRP | UniProtAcc | Q3V5I5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (285) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3838 | ||||||||
| Ortholog | WBGene00038972 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| OMA | |||||||||
| Inparanoid_8 | |||||||||
| WBGene00067923 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WBGene00159335 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WBGene00152304 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00156434 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| chrIII_pilon.g6963 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| chrIII_pilon.g6967 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00022335 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00000774 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00006697 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00011059 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016245 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including MSaapaapa; MSpapaapa; RID; germ line; and germline precursor cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; glp-1; and eat-2 based on microarray; RNA-seq; and proteomic studies. Is affected by seven chemicals including rotenone; Alovudine; and stavudine based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y82E9BR.19 | |||||||
| Corresponding_CDS_history | Y82E9BR.19:wp143 | ||||||||
| Corresponding_transcript | Y82E9BR.19.1 | ||||||||
| Other_sequence | CR07083 | ||||||||
| MA02993 | |||||||||
| Dviv_isotig19208 | |||||||||
| CRC09353_1 | |||||||||
| Associated_feature | WBsf991296 | ||||||||
| WBsf991297 | |||||||||
| WBsf1014235 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058590 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1021250 | ||||||||
| Expr1039859 | |||||||||
| Expr1162000 | |||||||||
| Expr2008477 | |||||||||
| Expr2026717 | |||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (99) | |||||||||
| Interaction | WBInteraction000575591 | ||||||||
| Map_info | Positive | Positive_clone | Y82E9BR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -21.8217 | |||||||
| Method | Gene |
