WormBase Tree Display for Gene: WBGene00022214
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WBGene00022214 | SMap | S_parent | Sequence | Y73B3A | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | ||||||||
Name | CGC_name | cal-6 | Person_evidence | WBPerson260 | ||||||
Sequence_name | Y73B3A.12 | |||||||||
Molecular_name | Y73B3A.12 | |||||||||
Other_name | CELE_Y73B3A.12 | Accession_evidence | NDB | BX284606 | ||||||
Public_name | cal-6 | |||||||||
DB_info | Database | AceView | gene | XA777 | ||||||
WormQTL | gene | WBGene00022214 | ||||||||
WormFlux | gene | WBGene00022214 | ||||||||
NDB | locus_tag | CELE_Y73B3A.12 | ||||||||
NCBI | gene | 190630 | ||||||||
Species | Caenorhabditis elegans | |||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
2 | 09 Mar 2012 14:04:45 | WBPerson2970 | Name_change | CGC_name | cal-6 | |||||
3 | 19 Apr 2016 10:54:36 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
Status | Live | |||||||||
Gene_info | Biotype | SO:0000336 | ||||||||
Gene_class | cal | |||||||||
Allele (15) | ||||||||||
RNASeq_FPKM (74) | ||||||||||
Ortholog | WBGene00115132 | Pristionchus pacificus | From_analysis | OMA | ||||||
WBGene00148309 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
WBGene00147688 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
WBGene00123425 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
WBGene00061101 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
Paralog | WBGene00009585 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00017394 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
Structured_description | Automated_description | Enriched in head mesodermal cell and neurons based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; eat-2; and alg-1 based on microarray and RNA-seq studies. Is affected by four chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | |||||||||
WBPerson37462 | ||||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
Molecular_info | Corresponding_CDS_history | Y73B3A.12:wp253 | ||||||||
Corresponding_pseudogene | Y73B3A.12 | |||||||||
Other_sequence | GR12089 | |||||||||
GRC00816_1 | ||||||||||
PT00806 | ||||||||||
Associated_feature | WBsf235246 | |||||||||
WBsf235247 | ||||||||||
WBsf235248 | ||||||||||
Experimental_info | Expr_pattern | Expr1026634 | ||||||||
Expr1039798 | ||||||||||
Expr1161694 | ||||||||||
Microarray_results (11) | ||||||||||
Expression_cluster (52) | ||||||||||
Map_info | Map | X | Position | -20.8459 | ||||||
Positive | Positive_clone | Y73B3A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
Pseudo_map_position | ||||||||||
Reference | WBPaper00050050 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |