WormBase Tree Display for Gene: WBGene00022202
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| WBGene00022202 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y72A10A.1 | |||||||
| Molecular_name (11) | |||||||||
| Other_name | Y72A10A.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y72A10A.1 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | Y72A10A.1 | ||||||||
| DB_info | Database | AceView | gene | XG748 | |||||
| WormQTL | gene | WBGene00022202 | |||||||
| WormFlux | gene | WBGene00022202 | |||||||
| NDB | locus_tag | CELE_Y72A10A.1 | |||||||
| NCBI | gene | 190620 | |||||||
| RefSeq | protein | NM_001381000.1 | |||||||
| NM_001381001.1 | |||||||||
| NR_138530.1 | |||||||||
| NM_001330902.4 | |||||||||
| TrEMBL | UniProtAcc | A0A1C3NSM7 | |||||||
| Q3V5K9 | |||||||||
| A0A1C3NSP0 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A1C3NSM7 | |||||||
| RNAcentral | URSid | URS00009CF2F9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (138) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (28) | |||||||||
| Structured_description | Automated_description | Enriched in muscle cell; neurons; rectal muscle; and retrovesicular ganglion based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and sir-2.1 based on tiling array; microarray; RNA-seq; and proteomic studies. Is affected by twelve chemicals including rotenone; Zidovudine; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily and Leucine-rich repeat domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y72A10A.1a | |||||||
| Y72A10A.1b | |||||||||
| Y72A10A.1c | |||||||||
| Corresponding_CDS_history | Y72A10A.1:wp128 | ||||||||
| Corresponding_transcript | Y72A10A.1d | ||||||||
| Y72A10A.1a.1 | |||||||||
| Y72A10A.1a.2 | |||||||||
| Y72A10A.1b.1 | |||||||||
| Y72A10A.1c.1 | |||||||||
| Other_sequence (25) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058280 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021382 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037799 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004815 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00108536 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012865 | ||||||||
| Expr1161690 | |||||||||
| Expr2008338 | |||||||||
| Expr2026579 | |||||||||
| Drives_construct | WBCnstr00024336 | ||||||||
| Construct_product | WBCnstr00024336 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (170) | |||||||||
| Interaction | WBInteraction000536583 | ||||||||
| Map_info | Positive | Positive_clone | Y72A10A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -3.65712 | |||||||
| Method | Gene |
