WormBase Tree Display for Gene: WBGene00022200
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| WBGene00022200 | SMap | S_parent | Sequence | Y71H10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fard-1 | Person_evidence | WBPerson1157 | |||||
| Sequence_name | Y71H10A.2 | ||||||||
| Molecular_name | Y71H10A.2 | ||||||||
| Y71H10A.2.1 | |||||||||
| CE20354 | |||||||||
| Y71H10A.2.2 | |||||||||
| Y71H10A.2.3 | |||||||||
| Y71H10A.2.4 | |||||||||
| Other_name | CELE_Y71H10A.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | fard-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 01 Dec 2011 16:11:43 | WBPerson2970 | Name_change | CGC_name | fard-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fard | ||||||||
| Allele (70) | |||||||||
| Strain | WBStrain00004025 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00098136 | ||||||||
| 00098137 | |||||||||
| 00098138 | |||||||||
| 00098139 | |||||||||
| 00098140 | |||||||||
| 00098141 | |||||||||
| 00098142 | |||||||||
| 00098143 | |||||||||
| 00098144 | |||||||||
| 00126376 | |||||||||
| Ortholog (56) | |||||||||
| Structured_description | Concise_description | fard-1 is an ortholog of human FAR2 (fatty acyl CoA reductase 2) and FAR1 (fatty acyl CoA reductase 1); fard-1 is predicted to have fatty-acyl-CoA reductase (alcohol-forming) activity, based on protein domain information; FARD-1 is required for the formation of ether lipids. | Paper_evidence | WBPaper00048987 | |||||
| WBPaper00045689 | |||||||||
| Person_evidence | WBPerson681 | ||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 10 Feb 2016 00:00:00 | ||||||||
| Automated_description | Predicted to enable alcohol-forming very long-chain fatty acyl-CoA reductase activity. Predicted to be involved in long-chain fatty-acyl-CoA metabolic process. Predicted to be located in peroxisome. Human ortholog(s) of this gene implicated in rhizomelic chondrodysplasia punctate type 4. Is an ortholog of human FAR1 (fatty acyl-CoA reductase 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081243 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:26222) | ||||
| Molecular_info | Corresponding_CDS | Y71H10A.2 | |||||||
| Corresponding_transcript | Y71H10A.2.1 | ||||||||
| Y71H10A.2.2 | |||||||||
| Y71H10A.2.3 | |||||||||
| Y71H10A.2.4 | |||||||||
| Other_sequence (39) | |||||||||
| Associated_feature | WBsf662569 | ||||||||
| WBsf662570 | |||||||||
| WBsf662571 | |||||||||
| WBsf718534 | |||||||||
| WBsf1004483 | |||||||||
| WBsf1022544 | |||||||||
| WBsf235420 | |||||||||
| WBsf235421 | |||||||||
| WBsf235422 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037788 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00058227 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021366 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026120 | ||||||||
| Expr1039790 | |||||||||
| Expr1161646 | |||||||||
| Expr2011428 | |||||||||
| Expr2029666 | |||||||||
| Drives_construct | WBCnstr00024337 | ||||||||
| Construct_product | WBCnstr00024337 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (177) | |||||||||
| Interaction | WBInteraction000508725 | ||||||||
| WBInteraction000540486 | |||||||||
| WBInteraction000551665 | |||||||||
| WBInteraction000577123 | |||||||||
| WBInteraction000581268 | |||||||||
| WBInteraction000584986 | |||||||||
| WBInteraction000585852 | |||||||||
| Map_info | Map | X | Position | -12.6706 | |||||
| Positive | Positive_clone | Y71H10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042257 | |||||||||
| WBPaper00048987 | |||||||||
| WBPaper00052854 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056920 | |||||||||
| WBPaper00061547 | |||||||||
| WBPaper00064898 | |||||||||
| WBPaper00065917 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
