WormBase Tree Display for Gene: WBGene00022189
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| WBGene00022189 | SMap | S_parent | Sequence | Y71H2AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y71H2AR.2 | |||||||
| Molecular_name | Y71H2AR.2 | ||||||||
| Y71H2AR.2.1 | |||||||||
| CE54189 | |||||||||
| Other_name | Y71H2AR.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y71H2AR.2 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | Y71H2AR.2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (35) | |||||||||
| Strain | WBStrain00037431 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00091797 | ||||||||
| 00091798 | |||||||||
| 00091799 | |||||||||
| 00091800 | |||||||||
| 00126359 | |||||||||
| 00126360 | |||||||||
| Ortholog (51) | |||||||||
| Paralog (29) | |||||||||
| Structured_description | Automated_description | Predicted to enable cysteine-type endopeptidase activity. Predicted to be involved in proteolysis involved in protein catabolic process. Predicted to be located in extracellular space. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease; Down syndrome; cerebrovascular disease (multiple); and pycnodysostosis. Is an ortholog of human CTSK (cathepsin K) and CTSS (cathepsin S). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2545) | ||||
| DOID:2378 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2545) | ||||||
| DOID:3407 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2545) | ||||||
| DOID:14250 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2545) | ||||||
| DOID:870 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2545) | ||||||
| DOID:0080038 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2536) | ||||||
| DOID:10941 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2536,HGNC:2545) | ||||||
| Molecular_info | Corresponding_CDS | Y71H2AR.2 | |||||||
| Corresponding_CDS_history | Y71H2AR.2:wp275 | ||||||||
| Corresponding_transcript | Y71H2AR.2.1 | ||||||||
| Associated_feature | WBsf1014465 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00115192 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00076842 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021367 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00065289 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058255 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1161674 | ||||||||
| Expr2026571 | |||||||||
| Microarray_results (11) | |||||||||
| Expression_cluster (92) | |||||||||
| Map_info | Positive | Positive_clone | Y71H2AR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -9.70008 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
