WormBase Tree Display for Gene: WBGene00022101
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| WBGene00022101 | SMap | S_parent | Sequence | Y69A2AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y69A2AR.32 | |||||||
| Molecular_name | Y69A2AR.32a | ||||||||
| Y69A2AR.32a.1 | |||||||||
| CE36368 | |||||||||
| Y69A2AR.32b | |||||||||
| CE36369 | |||||||||
| Y69A2AR.32c | |||||||||
| CE48965 | |||||||||
| Y69A2AR.32b.1 | |||||||||
| Y69A2AR.32c.1 | |||||||||
| Other_name | CELE_Y69A2AR.32 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y69A2AR.32 | ||||||||
| DB_info | Database | AceView | gene | 4D375 | |||||
| WormQTL | gene | WBGene00022101 | |||||||
| WormFlux | gene | WBGene00022101 | |||||||
| NDB | locus_tag | CELE_Y69A2AR.32 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022101|UniProtKB=H2L0S1 | |||||||
| family | PTHR11208 | ||||||||
| NCBI | gene | 177042 | |||||||
| RefSeq | protein | NM_171289.6 | |||||||
| NM_171290.6 | |||||||||
| NM_001380098.1 | |||||||||
| TrEMBL | UniProtAcc | H2L0S1 | |||||||
| U4PCF9 | |||||||||
| Q8T871 | |||||||||
| UniProt_GCRP | UniProtAcc | H2L0S1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (33) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00023292 | ||||||||
| 00023293 | |||||||||
| 00023294 | |||||||||
| 00023295 | |||||||||
| 00023296 | |||||||||
| 00085044 | |||||||||
| 00085045 | |||||||||
| 00126275 | |||||||||
| 00126276 | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00001595 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00006423 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010046 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00013325 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00013808 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00017098 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019509 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00044674 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00304811 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable mRNA binding activity. Predicted to be involved in regulation of mRNA splicing, via spliceosome. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y69A2AR.32a | |||||||
| Y69A2AR.32b | |||||||||
| Y69A2AR.32c | |||||||||
| Corresponding_transcript | Y69A2AR.32a.1 | ||||||||
| Y69A2AR.32b.1 | |||||||||
| Y69A2AR.32c.1 | |||||||||
| Other_sequence | HC06277 | ||||||||
| EX543934.1 | |||||||||
| EX546114.1 | |||||||||
| CJC13051_1 | |||||||||
| CBC11526_1 | |||||||||
| HCC02924_1 | |||||||||
| TIC00325_1 | |||||||||
| AJ616599.1 | |||||||||
| Associated_feature | WBsf645840 | ||||||||
| WBsf645841 | |||||||||
| WBsf660000 | |||||||||
| WBsf228036 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058047 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00002306 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021312 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058052 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021474 | ||||||||
| Expr1039721 | |||||||||
| Expr1161469 | |||||||||
| Expr2008229 | |||||||||
| Expr2026471 | |||||||||
| Drives_construct | WBCnstr00024345 | ||||||||
| Construct_product | WBCnstr00024345 | ||||||||
| Microarray_results (33) | |||||||||
| Expression_cluster (110) | |||||||||
| SAGE_tag | SAGE:aattgctcaccttcggg | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| SAGE:ccacgtggcccgagaat | Strand | Antisense | |||||||
| SAGE:aaacgtggca | Strand | Antisense | |||||||
| SAGE:ggaggcgagcagtgttt | Strand | Antisense | |||||||
| SAGE:ccgtggaagt | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:ctcattggat | Strand | Antisense | |||||||
| SAGE:aattgctcac | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:ccacgtggcc | Strand | Antisense | |||||||
| SAGE:aaacgtggcaattctgg | Strand | Antisense | |||||||
| Map_info | Positive | Positive_clone | Y69A2AR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -7.05924 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00060161 | |||||||||
| Method | Gene |
