WormBase Tree Display for Gene: WBGene00022045
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WBGene00022045 | SMap | S_parent | Sequence | Y66H1A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | mrpl-55 | Person_evidence | WBPerson261 | |||||
Sequence_name | Y66H1A.3 | ||||||||
Molecular_name | Y66H1A.3 | ||||||||
Y66H1A.3.1 | |||||||||
CE31659 | |||||||||
Other_name | tag-313 | Person_evidence | WBPerson201 | ||||||
CELE_Y66H1A.3 | Accession_evidence | NDB | BX284604 | ||||||
Public_name | mrpl-55 | ||||||||
DB_info | Database | AceView | gene | 4B197 | |||||
WormQTL | gene | WBGene00022045 | |||||||
WormFlux | gene | WBGene00022045 | |||||||
NDB | locus_tag | CELE_Y66H1A.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00022045|UniProtKB=Q9TYJ8 | |||||||
family | PTHR34095 | ||||||||
NCBI | gene | 176873 | |||||||
RefSeq | protein | NM_067529.6 | |||||||
TREEFAM | TREEFAM_ID | TF320422 | |||||||
TrEMBL | UniProtAcc | Q9TYJ8 | |||||||
UniProt_GCRP | UniProtAcc | Q9TYJ8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 22 Apr 2005 11:55:18 | WBPerson2970 | Name_change | CGC_name | tag | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | mrpl | ||||||||
Allele (19) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00097422 | ||||||||
00097423 | |||||||||
00097424 | |||||||||
00097425 | |||||||||
00097426 | |||||||||
00126220 | |||||||||
00126221 | |||||||||
Contained_in_operon | CEOP4028 | ||||||||
Ortholog (17) | |||||||||
Structured_description | Automated_description | Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Located in mitochondrion. Is an ortholog of human MRPL55 (mitochondrial ribosomal protein L55). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y66H1A.3 | |||||||
Corresponding_CDS_history | Y66H1A.3:wp82 | ||||||||
Corresponding_transcript | Y66H1A.3.1 | ||||||||
Other_sequence (11) | |||||||||
Associated_feature | WBsf645757 | ||||||||
WBsf227846 | |||||||||
Experimental_info | RNAi_result | WBRNAi00108704 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00108715 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00057958 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00009408 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00108726 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00108663 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00108588 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00026911 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr9536 | ||||||||
Expr1014804 | |||||||||
Expr1039694 | |||||||||
Expr1161385 | |||||||||
Expr2013731 | |||||||||
Expr2031966 | |||||||||
Construct_product | WBCnstr00014101 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (96) | |||||||||
Interaction (2) | |||||||||
Map_info | Map | IV | Position | -25.9807 | Error | 0.006123 | |||
Positive | Positive_clone | Y66H1A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5108 | |||||||
4992 | |||||||||
5489 | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038444 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00065026 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |