WormBase Tree Display for Gene: WBGene00022044
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WBGene00022044 | SMap | S_parent | Sequence | Y66H1A | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | dpm-1 | |||||
Sequence_name | Y66H1A.2 | ||||||
Molecular_name | Y66H1A.2a | ||||||
Y66H1A.2a.1 | |||||||
CE37731 | |||||||
Y66H1A.2b | |||||||
CE48726 | |||||||
Y66H1A.2b.1 | |||||||
Other_name | CELE_Y66H1A.2 | Accession_evidence | NDB | BX284604 | |||
Public_name | dpm-1 | ||||||
DB_info | Database (12) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | dpm | ||||||
Allele (37) | |||||||
Strain | WBStrain00051416 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (14) | |||||||
Contained_in_operon | CEOP4028 | ||||||
Ortholog (36) | |||||||
Paralog | WBGene00019276 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Concise_description | dpm-1 encodes a putative catalytic subunit of dolichol phosphate mannosyltransferase, orthologous to budding yeast and human DPM1 (OMIM:603503, mutated in congenital disorder of glycosylation type Ie); in mass RNAi assays, DPM-1 is required for embryonic viability and proper cortical motion in the early embryo. | Paper_evidence | WBPaper00025054 | |||
WBPaper00031552 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 02 Mar 2008 00:00:00 | ||||||
Automated_description | Predicted to enable dolichyl-phosphate beta-D-mannosyltransferase activity. Predicted to be involved in dolichol-linked oligosaccharide biosynthetic process and protein O-linked mannosylation. Predicted to be located in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Ie. Is an ortholog of human DPM1 (dolichyl-phosphate mannosyltransferase subunit 1, catalytic). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0080557 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3005) | ||
Molecular_info | Corresponding_CDS | Y66H1A.2a | |||||
Y66H1A.2b | |||||||
Corresponding_CDS_history | Y66H1A.2:wp134 | ||||||
Corresponding_transcript | Y66H1A.2a.1 | ||||||
Y66H1A.2b.1 | |||||||
Other_sequence (67) | |||||||
Associated_feature | WBsf659877 | ||||||
WBsf659878 | |||||||
WBsf659879 | |||||||
WBsf995144 | |||||||
WBsf1016548 | |||||||
WBsf227847 | |||||||
WBsf227848 | |||||||
Experimental_info | RNAi_result | WBRNAi00115334 | Inferred_automatically | RNAi_primary | |||
WBRNAi00115324 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00111252 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00111268 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00115286 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00111269 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00057957 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00115265 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00115292 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037716 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1028542 | ||||||
Expr1039693 | |||||||
Expr1161384 | |||||||
Expr2011051 | |||||||
Expr2029288 | |||||||
Microarray_results (20) | |||||||
Expression_cluster (87) | |||||||
Interaction (99) | |||||||
Map_info (3) | |||||||
Reference | WBPaper00032961 | ||||||
WBPaper00038491 | |||||||
WBPaper00045573 | |||||||
WBPaper00055090 | |||||||
WBPaper00061547 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |