WormBase Tree Display for Gene: WBGene00022015
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| WBGene00022015 | SMap | S_parent | Sequence | Y61A9LA | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y61A9LA.3 | |||||||
| Molecular_name (16) | |||||||||
| Other_name | Y61A9LA.c | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y61A9LA.e | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y61A9LA.k | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y61A9LA.l | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y61A9LA.3 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y61A9LA.3 | ||||||||
| DB_info | Database | AceView | gene | 5F63C | |||||
| 5F63 | |||||||||
| WormQTL | gene | WBGene00022015 | |||||||
| WormFlux | gene | WBGene00022015 | |||||||
| NDB | locus_tag | CELE_Y61A9LA.3 | |||||||
| NCBI | gene | 178848 | |||||||
| RefSeq | protein | NM_001351868.3 | |||||||
| NM_001351865.5 | |||||||||
| NM_001351867.3 | |||||||||
| NR_147823.1 | |||||||||
| NM_001351866.4 | |||||||||
| NM_071840.4 | |||||||||
| TrEMBL | UniProtAcc | A0A1X7RBU1 | |||||||
| A0A1X7RCX1 | |||||||||
| Q8MXS5 | |||||||||
| H2L071 | |||||||||
| A0A1X7RBQ5 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8MXS5 | |||||||
| RNAcentral | URSid | URS0000B97F60 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (290) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Structured_description | Automated_description | Enriched in germ line; hypodermis; and neurons based on RNA-seq and microarray studies. Is affected by several genes including daf-2; sir-2.1; and fbf-1 based on microarray and RNA-seq studies. Is affected by resveratrol; Sirolimus; and silicon dioxide nanoparticle based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y61A9LA.3a | |||||||
| Y61A9LA.3c | |||||||||
| Y61A9LA.3d | |||||||||
| Y61A9LA.3e | |||||||||
| Y61A9LA.3f | |||||||||
| Corresponding_CDS_history | Y61A9LA.3b:wp126 | ||||||||
| Y61A9LA.3b:wp259 | |||||||||
| Y61A9LA.3c:wp259 | |||||||||
| Corresponding_transcript | Y61A9LA.3b | ||||||||
| Y61A9LA.3a.1 | |||||||||
| Y61A9LA.3c.1 | |||||||||
| Y61A9LA.3d.1 | |||||||||
| Y61A9LA.3e.1 | |||||||||
| Y61A9LA.3f.1 | |||||||||
| Other_sequence | CRC10189_1 | ||||||||
| CRC06750_1 | |||||||||
| CR04058 | |||||||||
| CRC00256_1 | |||||||||
| Acan_isotig20307 | |||||||||
| ES561344.1 | |||||||||
| CN478246.1 | |||||||||
| SSC01526_1 | |||||||||
| SS03283 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00076833 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021203 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037664 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057829 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021202 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015682 | ||||||||
| Expr1039673 | |||||||||
| Expr1161265 | |||||||||
| Expr2008128 | |||||||||
| Expr2026367 | |||||||||
| Microarray_results (42) | |||||||||
| Expression_cluster (78) | |||||||||
| Interaction | WBInteraction000544676 | ||||||||
| WBInteraction000548484 | |||||||||
| WBInteraction000551327 | |||||||||
| WBInteraction000551328 | |||||||||
| WBInteraction000551329 | |||||||||
| WBInteraction000581247 | |||||||||
| Map_info | Positive | Positive_clone | Y61A9LA | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -4.9833 | |||||||
| Reference | WBPaper00062311 | ||||||||
| Method | Gene |
