WormBase Tree Display for Gene: WBGene00021996

WBGene00021996 SMap: S_parent: Sequence: Y59E9AL
  Identity: Version: 2
    Name: CGC_name: cylc-1 Paper_evidence: WBPaper00049378
          Person_evidence: WBPerson2119
      Sequence_name: Y59E9AL.6
      Molecular_name: Y59E9AL.6
        Y59E9AL.6.1
        CE25514
      Other_name: CELE_Y59E9AL.6 Accession_evidence: NDB BX284604
      Public_name: cylc-1
    DB_info: Database: AceView gene 4F990
        WormQTL gene WBGene00021996
        WormFlux gene WBGene00021996
        NDB locus_tag CELE_Y59E9AL.6
        Panther gene CAEEL|WormBase=WBGene00021996|UniProtKB=Q9N328
          family PTHR31765
        NCBI gene 177298
        RefSeq protein NM_068344.8
        TrEMBL UniProtAcc Q9N328
        UniProt_GCRP UniProtAcc Q9N328
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 11 Sep 2020 10:07:36 WBPerson1983 Name_change: CGC_name: cylc-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cylc
    Allele (32)
    RNASeq_FPKM (74)
    Ortholog (14)
    Paralog: WBGene00008063 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
      WBGene00009888 Caenorhabditis elegans From_analysis: Panther
      WBGene00015908 Caenorhabditis elegans From_analysis: Panther
      WBGene00017112 Caenorhabditis elegans From_analysis: Panther
      WBGene00020713 Caenorhabditis elegans From_analysis: Panther
      WBGene00022706 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Enriched in several structures, including body wall muscle cell; cholinergic neurons; germ line; hypodermis; and sperm based on proteomic; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray and RNA-seq studies. Is affected by twenty-eight chemicals including Ethanol; methylmercury hydroxide; and 1-methylnicotinamide based on RNA-seq; microarray; and proteomic studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y59E9AL.6
    Corresponding_transcript: Y59E9AL.6.1
    Other_sequence (55)
    Associated_feature: WBsf230069
  Experimental_info: RNAi_result: WBRNAi00022680 Inferred_automatically: RNAi_primary
      WBRNAi00037635 Inferred_automatically: RNAi_primary
      WBRNAi00021176 Inferred_automatically: RNAi_primary
      WBRNAi00022659 Inferred_automatically: RNAi_primary
      WBRNAi00057772 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021493
      Expr1161198
      Expr2026341
    Drives_construct: WBCnstr00024370
    Construct_product: WBCnstr00024370
    Microarray_results (15)
    Expression_cluster (223)
    Interaction: WBInteraction000548841
  Map_info: Map: IV Position: 1.57302
    Positive: Positive_clone: Y59E9AL Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene